RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	ASI3	P53983	676 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	RCE1	Q03530	315 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	BNA7	Q04066	261 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	MHR1	Q06630	226 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	COX2	P00410	251 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	MET2	P08465	486 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	INO2	P26798	304 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	MAL32	P38158	584 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	YBR285W	P38354	144 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	PRE5	P40302	234 aa	Known RBP	4.03	□□□□□ -1.76
UBA3	YPR066W	PFS2	P42841	465 aa	Known RBP	4.03	□□□□□ -1.76
UBA3	YPR066W	FAR7	P43592	221 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	MAL12	P53341	584 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	MRX11	Q03079	207 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	FIT3	Q08907	204 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	UIP4	Q08926	304 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	POM33	Q12164	279 aa		4.03	□□□□□ -1.76
UBA3	YPR066W	URA2	P07259	2214 aa	Known RBP	4.02	□□□□□ -1.77
UBA3	YPR066W	COX5B	P00425	151 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	BGL2	P15703	313 aa	Known RBP	4.02	□□□□□ -1.77
UBA3	YPR066W	MRPL20	P22354	195 aa	Predicted RBP	4.02	□□□□□ -1.77
UBA3	YPR066W	OAC1	P32332	324 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	IES6	P32617	166 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	GPI18	P38211	433 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	YBR220C	P38318	560 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	SIP18	P50263	79 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	YGL101W	P53144	215 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	YLR152C	P54072	576 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	SED1	Q01589	338 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	NUP49	Q02199	472 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	PET191	Q02772	108 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	VIK1	Q12045	647 aa		4.02	□□□□□ -1.77
UBA3	YPR066W	STE18	P18852	110 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	ASF2	P32448	525 aa	Predicted RBP	4.01	□□□□□ -1.77
UBA3	YPR066W	PAM16	P42949	149 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	YAR1	P46683	200 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	SDS23	P53172	527 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	YNR066C	P53752	436 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	TIM11	P81449	96 aa	Predicted RBP	4.01	□□□□□ -1.77
UBA3	YPR066W	AIM36	Q03798	255 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	VBA1	Q04301	562 aa		4.01	□□□□□ -1.77
UBA3	YPR066W	YOR097C	Q12274	175 aa	Predicted RBP	4.01	□□□□□ -1.77
UBA3	YPR066W	KIN28	P06242	306 aa		4	□□□□□ -1.77
UBA3	YPR066W	MRPL27	P36526	146 aa	Predicted RBP	4	□□□□□ -1.77
UBA3	YPR066W	SMP1	P38128	452 aa		4	□□□□□ -1.77
UBA3	YPR066W	ECM14	P38836	430 aa		4	□□□□□ -1.77
UBA3	YPR066W	AGX1	P43567	385 aa		4	□□□□□ -1.77
UBA3	YPR066W	MNT4	P53745	580 aa		4	□□□□□ -1.77
UBA3	YPR066W	COG5	P53951	403 aa		4	□□□□□ -1.77
UBA3	YPR066W	YMR279C	Q03263	540 aa		4	□□□□□ -1.77
UBA3	YPR066W	YMD8	Q03697	442 aa		4	□□□□□ -1.77
UBA3	YPR066W	GMC1	Q04399	608 aa		4	□□□□□ -1.77
UBA3	YPR066W	YLR173W	Q06247	608 aa		4	□□□□□ -1.77
UBA3	YPR066W	PST2	Q12335	198 aa	Known RBP	4	□□□□□ -1.77
UBA3	YPR066W	MHF1	Q3E835	90 aa		4	□□□□□ -1.77
UBA3	YPR066W	FBA1	P14540	359 aa	Known RBP	3.99	□□□□□ -1.77
UBA3	YPR066W	SPT4	P32914	102 aa	Predicted RBP	3.99	□□□□□ -1.77
UBA3	YPR066W	YPS5	P53057	165 aa		3.99	□□□□□ -1.77
UBA3	YPR066W	CPD1	P53314	239 aa		3.99	□□□□□ -1.77
UBA3	YPR066W	SAY1	P53324	424 aa		3.99	□□□□□ -1.77
UBA3	YPR066W	MRPS16	Q02608	121 aa		3.99	□□□□□ -1.77
UBA3	YPR066W	RPL21A	Q02753	160 aa	Known RBP	3.99	□□□□□ -1.77
UBA3	YPR066W	PEX30	Q06169	523 aa		3.99	□□□□□ -1.77
UBA3	YPR066W	MDN1	Q12019	4910 aa	Known RBP	3.98	□□□□□ -1.77
UBA3	YPR066W	PHO80	P20052	293 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	ZRT3	P34240	503 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	RPS20	P38701	121 aa	Known RBP	3.98	□□□□□ -1.77
UBA3	YPR066W	THO1	P40040	218 aa	Known RBP	3.98	□□□□□ -1.77
UBA3	YPR066W	FLX1	P40464	311 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	GLR1	P41921	483 aa	Known RBP	3.98	□□□□□ -1.77
UBA3	YPR066W	NQM1	P53228	333 aa	Predicted RBP	3.98	□□□□□ -1.77
UBA3	YPR066W	GRX3	Q03835	250 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	TSA2	Q04120	196 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	YDR391C	Q04170	232 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	RNH1	Q04740	348 aa		3.98	□□□□□ -1.77
UBA3	YPR066W	DBF2	P22204	572 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	CLB6	P32943	380 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	YOX1	P34161	385 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	PRS3	P38689	320 aa	Known RBP	3.97	□□□□□ -1.77
UBA3	YPR066W	CTR2	P38865	189 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	IPT1	P38954	527 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	YIA6	P40556	373 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	YIR020C	P40575	100 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	APJ1	P53940	528 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	HHT1	P61830	136 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	SNZ1	Q03148	297 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	NMA1	Q06178	401 aa	Known RBP	3.97	□□□□□ -1.77
UBA3	YPR066W	YOR292C	Q08743	309 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	RRS1	Q08746	203 aa	Known RBP	3.97	□□□□□ -1.77
UBA3	YPR066W	YOR029W	Q12243	111 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	TFC7	Q12415	435 aa		3.97	□□□□□ -1.77
UBA3	YPR066W	EGD2	P38879	174 aa	Known RBP	3.96	□□□□□ -1.78
UBA3	YPR066W	YER184C	P39961	794 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	YGL262W	P53054	175 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	TPN1	P53099	579 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	YGR018C	P53211	109 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	HAL1	Q01766	294 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	YMR252C	Q04814	134 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	DPP1	Q05521	289 aa		3.96	□□□□□ -1.78
UBA3	YPR066W	HEM25	Q07534	307 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms