RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C ARC15P40518 154 aaRIP-Chip data1.61□□□□□ -2.15not detected
SHE2YKL130C RPA43P46669 326 aa1.61□□□□□ -2.15
SHE2YKL130C GON7P46984 123 aa1.61□□□□□ -2.15
SHE2YKL130C YGR026WP53217 278 aa1.61□□□□□ -2.15
SHE2YKL130C LSM7P53905 115 aaKnown RBP1.61□□□□□ -2.15
SHE2YKL130C RSM10Q03201 203 aa1.61□□□□□ -2.15
SHE2YKL130C GIM5Q04493 163 aa1.61□□□□□ -2.15
SHE2YKL130C YNG1Q08465 219 aa1.61□□□□□ -2.15
SHE2YKL130C AGC1Q12482 902 aa1.61□□□□□ -2.15
SHE2YKL130C CMC2Q3E7A4 109 aa1.61□□□□□ -2.15
SHE2YKL130C SAS5Q99314 248 aa1.61□□□□□ -2.15
SHE2YKL130C Q0255P03881 472 aa1.6□□□□□ -2.15
SHE2YKL130C RPL25P04456 142 aaKnown RBP1.6□□□□□ -2.15
SHE2YKL130C SNF6P18888 332 aa1.6□□□□□ -2.15
SHE2YKL130C RSA4P25382 515 aaKnown RBP1.6□□□□□ -2.15
SHE2YKL130C ATG22P25568 528 aa1.6□□□□□ -2.15
SHE2YKL130C TCA17P32613 152 aa1.6□□□□□ -2.15
SHE2YKL130C AGA2P32781 87 aa1.6□□□□□ -2.15
SHE2YKL130C ECM4P36156 370 aa1.6□□□□□ -2.15
SHE2YKL130C YHR125WP38831 101 aa1.6□□□□□ -2.15
SHE2YKL130C COG3P40094 801 aa1.6□□□□□ -2.15
SHE2YKL130C TIF34P40217 347 aaKnown RBP1.6□□□□□ -2.15
SHE2YKL130C RTC4P53850 401 aa1.6□□□□□ -2.15
SHE2YKL130C YNL010WP53981 241 aaKnown RBP1.6□□□□□ -2.15
SHE2YKL130C PEX12Q04370 399 aa1.6□□□□□ -2.15
SHE2YKL130C LPP1Q04396 274 aa1.6□□□□□ -2.15
SHE2YKL130C ATG39Q06159 398 aa1.6□□□□□ -2.15
SHE2YKL130C YPR195CQ06594 109 aa1.6□□□□□ -2.15
SHE2YKL130C YOR268CQ08734 132 aa1.6□□□□□ -2.15
SHE2YKL130C TDA8Q6B2U8 126 aa1.6□□□□□ -2.15
SHE2YKL130C CDC7P06243 507 aa1.59□□□□□ -2.15
SHE2YKL130C YPR170W-BP0C5R9 85 aa1.59□□□□□ -2.15
SHE2YKL130C FBA1P14540 359 aaKnown RBP1.59□□□□□ -2.15
SHE2YKL130C CCA1P21269 546 aa1.59□□□□□ -2.15
SHE2YKL130C MAG1P22134 296 aaKnown RBP1.59□□□□□ -2.15
SHE2YKL130C ARC19P33204 171 aaKnown RBP1.59□□□□□ -2.15
SHE2YKL130C YKR032WP36127 104 aa1.59□□□□□ -2.15
SHE2YKL130C SKG1P36169 355 aa1.59□□□□□ -2.15
SHE2YKL130C IRC22P40006 225 aa1.59□□□□□ -2.15
SHE2YKL130C YER188WP40103 239 aa1.59□□□□□ -2.15
SHE2YKL130C POG1P40473 351 aa1.59□□□□□ -2.15
SHE2YKL130C ERG10P41338 398 aaKnown RBP1.59□□□□□ -2.15
SHE2YKL130C FEX1Q08913 375 aa1.59□□□□□ -2.15
SHE2YKL130C FEX2Q08991 375 aa1.59□□□□□ -2.15
SHE2YKL130C RPL9AP05738 191 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C MRS1P07266 363 aa1.58□□□□□ -2.16
SHE2YKL130C PUT1P09368 476 aa1.58□□□□□ -2.16
SHE2YKL130C DPM1P14020 267 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C VMA11P32842 164 aa1.58□□□□□ -2.16
SHE2YKL130C PTM1P32857 523 aa1.58□□□□□ -2.16
SHE2YKL130C POP4P38336 279 aa1.58□□□□□ -2.16
SHE2YKL130C AST2P39945 430 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C HMF1P40037 129 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C PDS1P40316 373 aaPredicted RBP1.58□□□□□ -2.16
SHE2YKL130C AIM25P47140 327 aa1.58□□□□□ -2.16
SHE2YKL130C RPL9BP51401 191 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C YGL088WP53151 121 aa1.58□□□□□ -2.16
SHE2YKL130C YGR050CP53231 118 aa1.58□□□□□ -2.16
SHE2YKL130C SSU72P53538 206 aaPredicted RBP1.58□□□□□ -2.16
SHE2YKL130C COG5P53951 403 aa1.58□□□□□ -2.16
SHE2YKL130C PET191Q02772 108 aa1.58□□□□□ -2.16
SHE2YKL130C NOC4Q06512 552 aaPredicted RBP1.58□□□□□ -2.16
SHE2YKL130C YDL085C-AQ3E7B7 68 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C FKS1P38631 1876 aaKnown RBP1.58□□□□□ -2.16
SHE2YKL130C CDC8P00572 216 aa1.57□□□□□ -2.16
SHE2YKL130C SIR2P06700 562 aa1.57□□□□□ -2.16
SHE2YKL130C RPL35AP0CX84 120 aaKnown RBP1.57□□□□□ -2.16
SHE2YKL130C RPL35BP0CX85 120 aaKnown RBP1.57□□□□□ -2.16
SHE2YKL130C KRE1P17260 313 aa1.57□□□□□ -2.16
SHE2YKL130C TAH1P25638 111 aaPredicted RBP1.57□□□□□ -2.16
SHE2YKL130C TRR1P29509 319 aaKnown RBP1.57□□□□□ -2.16
SHE2YKL130C SCM4P32564 187 aa1.57□□□□□ -2.16
SHE2YKL130C YHL026CP38740 315 aa1.57□□□□□ -2.16
SHE2YKL130C SRP14P38985 146 aa1.57□□□□□ -2.16
SHE2YKL130C YER084WP40057 128 aa1.57□□□□□ -2.16
SHE2YKL130C PIR5P46999 287 aa1.57□□□□□ -2.16
SHE2YKL130C NRK1P53915 240 aa1.57□□□□□ -2.16
SHE2YKL130C SNO1Q03144 224 aa1.57□□□□□ -2.16
SHE2YKL130C PRM15Q03262 622 aa1.57□□□□□ -2.16
SHE2YKL130C GAS3Q03655 524 aa1.57□□□□□ -2.16
SHE2YKL130C ARO80Q04052 950 aa1.57□□□□□ -2.16
SHE2YKL130C FUS2Q05670 677 aa1.57□□□□□ -2.16
SHE2YKL130C YLR036CQ07986 203 aa1.57□□□□□ -2.16
SHE2YKL130C YOL024WQ08172 172 aa1.57□□□□□ -2.16
SHE2YKL130C YOL160WQ08321 113 aa1.57□□□□□ -2.16
SHE2YKL130C AKR2Q12013 749 aa1.57□□□□□ -2.16
SHE2YKL130C USB1Q12208 290 aaKnown RBP1.57□□□□□ -2.16
SHE2YKL130C PSF1Q12488 208 aa1.57□□□□□ -2.16
SHE2YKL130C YHR214C-EQ8TGK0 99 aa1.57□□□□□ -2.16
SHE2YKL130C IGO2Q9P305 131 aa1.57□□□□□ -2.16
SHE2YKL130C URB1P34241 1764 aaKnown RBP1.57□□□□□ -2.16
SHE2YKL130C YPR096CO13587 100 aa1.56□□□□□ -2.16
SHE2YKL130C REP2P03872 296 aa1.56□□□□□ -2.16
SHE2YKL130C YHR032W-AP0C5N6 59 aa1.56□□□□□ -2.16
SHE2YKL130C YLR156WP0CE96 114 aa1.56□□□□□ -2.16
SHE2YKL130C YLR159WP0CE97 114 aa1.56□□□□□ -2.16
SHE2YKL130C YLR161WP0CE98 114 aa1.56□□□□□ -2.16
SHE2YKL130C MGT1P26188 188 aa1.56□□□□□ -2.16
SHE2YKL130C MIG1P27705 504 aa1.56□□□□□ -2.16
SHE2YKL130C YIP3P53633 176 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms