RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CLUHO75153 1309 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 MYL1P05976 194 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 HOXA9P31269 272 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 YWHAHQ04917 246 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-231ENST00000641939 TMEM31Q5JXX7 168 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 RTL10Q7L3V2 364 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 OTOP3Q7RTS5 596 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 USP37Q86T82 979 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 PLCD3Q8N3E9 789 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 FSIP1Q8NA03 581 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 ZNF461Q8TAF7 563 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 SLC7A14Q8TBB6 771 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 SLC39A2Q9NP94 309 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 C11orf16Q9NQ32 467 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 FBXL5Q9UKA1 691 aa16.27■□□□□ 0.2
PHGDH-231ENST00000641939 NOTCH4Q99466 2003 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 WDR27A2RRH5 827 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 FAM86C2PA6NEL3 165 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 TULP1O00294 542 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-231ENST00000641939 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 KLRC4O43908 158 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 ABLIM3O94929 683 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 OAZ2O95190 189 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 TYMPP19971 482 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 ARPP19P56211 112 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 WNT7BP56706 349 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 SNRPFP62306 86 aaKnown RBP16.26■□□□□ 0.19
PHGDH-231ENST00000641939 TFAMQ00059 246 aaKnown RBP16.26■□□□□ 0.19
PHGDH-231ENST00000641939 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 NELFCDQ8IXH7 590 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 CACTINQ8WUQ7 758 aaKnown RBP16.26■□□□□ 0.19
PHGDH-231ENST00000641939 EDAQ92838 391 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 SENP8Q96LD8 212 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 GOLPH3LQ9H4A5 285 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 KIAA1586Q9HCI6 787 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 EXOC1Q9NV70 894 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 HSPBP1Q9NZL4 362 aa16.26■□□□□ 0.19
PHGDH-231ENST00000641939 TIMM13Q9Y5L4 95 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-231ENST00000641939 ZDBF2Q9HCK1 2354 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 ARHGEF37A1IGU5 675 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 SPTLC1O15269 473 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 CCL16O15467 120 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 XYLBO75191 536 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 POU2F2P09086 479 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 ODC1P11926 461 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 ELF1P32519 619 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 TAF6P49848 677 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 PSMD2Q13200 908 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 PTPN21Q16825 1174 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 KMT5BQ4FZB7 885 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 TPGS2Q68CL5 300 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 HS2ST1Q7LGA3 356 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 LRFN3Q9BTN0 628 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-231ENST00000641939 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 LIMD1Q9UGP4 676 aa16.25■□□□□ 0.19
PHGDH-231ENST00000641939 ATF2P15336 505 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 ZXDAP98168 799 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 STK4Q13043 487 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 KNOP1Q1ED39 458 aaKnown RBP16.24■□□□□ 0.19
PHGDH-231ENST00000641939 KRBA2Q6ZNG9 492 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 GRASPQ7Z6J2 395 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-231ENST00000641939 CBWD2Q8IUF1 395 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 TCEAL8Q8IYN2 117 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
PHGDH-231ENST00000641939 MAFFQ9ULX9 164 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 POLIQ9UNA4 740 aa16.24■□□□□ 0.19
PHGDH-231ENST00000641939 OR6C75A6NL08 312 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 PRR33A8MZF0 331 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 PRRG1O14668 218 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 CLIC2O15247 247 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
PHGDH-231ENST00000641939 ZNF202O95125 648 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
PHGDH-231ENST00000641939 CPB1P15086 417 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 POLR2BP30876 1174 aaKnown RBP16.23■□□□□ 0.19
PHGDH-231ENST00000641939 GBP2P32456 591 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-231ENST00000641939 PNPLA4P41247 253 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 CYP2J2P51589 502 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 SURF1Q15526 300 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 SV2CQ496J9 727 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 C1orf127Q8N9H9 656 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 XXYLT1Q8NBI6 393 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 CYP4F11Q9HBI6 524 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.23■□□□□ 0.19
PHGDH-231ENST00000641939 AFF4Q9UHB7 1163 aaKnown RBP16.23■□□□□ 0.19
PHGDH-231ENST00000641939 ITGA11Q9UKX5 1188 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 DSEQ9UL01 958 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 AGAP1Q9UPQ3 857 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
PHGDH-231ENST00000641939 GOLGA6L4A6NEF3 574 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 CYB561D2O14569 222 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 SEC24AO95486 1093 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 LRG1P02750 347 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms