RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ZNHIT6Q9NWK9 470 aaKnown RBP13.89□□□□□ -0.19
PHGDH-220ENST00000641570 MICAL3Q7RTP6 2002 aa13.89□□□□□ -0.19
PHGDH-220ENST00000641570 PIRO00625 290 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 CYB561D2O14569 222 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 TEX33O43247 280 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 DDHD2O94830 711 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
PHGDH-220ENST00000641570 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
PHGDH-220ENST00000641570 GALTP07902 379 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 PON1P27169 355 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 C15orf39Q6ZRI6 1047 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-220ENST00000641570 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 TMEM86AQ8N2M4 240 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 RABGGTAQ92696 567 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 FAXDC2Q96IV6 333 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
PHGDH-220ENST00000641570 C11orf84Q9BUA3 381 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-220ENST00000641570 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
PHGDH-220ENST00000641570 CYP3A43Q9HB55 503 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 COQ4Q9Y3A0 265 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 RALGAPA2Q2PPJ7 1873 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 ITIH6Q6UXX5 1313 aa13.88□□□□□ -0.19
PHGDH-220ENST00000641570 A0A1W2PPC1 479 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 H7C4K7 107 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-220ENST00000641570 VNN1O95497 513 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CST3P01034 146 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-220ENST00000641570 URODP06132 367 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CA3P07451 260 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CD58P19256 250 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 SLC9A1P19634 815 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 LILRA4P59901 499 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
PHGDH-220ENST00000641570 GCNT1Q02742 428 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CREMQ03060 361 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CUL2Q13617 745 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 FUT10Q6P4F1 479 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 ADGRF2Q8IZF7 708 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 SENP8Q96LD8 212 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CXCL16Q9H2A7 254 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 CEP72Q9P209 647 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 DNAJC12Q9UKB3 198 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 MTUS1Q9ULD2 1270 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
PHGDH-220ENST00000641570 SYN3O14994 580 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 UCHL3P15374 230 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 PCSK1P29120 753 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CDC25BP30305 580 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 PBX3P40426 434 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 STAT1P42224 750 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 LHX1P48742 406 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 TSPY1Q01534 308 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 YWHAHQ04917 246 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-220ENST00000641570 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 KLHDC7AQ5VTJ3 777 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 FAM171A1Q5VUB5 890 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 SPOPLQ6IQ16 392 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 ZNF280DQ6N043 979 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-220ENST00000641570 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 DPH6Q7L8W6 267 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CNGA4Q8IV77 575 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 VSTM4Q8IW00 320 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CPLX3Q8WVH0 158 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 SEMA4DQ92854 862 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 IGSF21Q96ID5 467 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 TNIP3Q96KP6 325 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 FAM124BQ9H5Z6 455 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CWH43Q9H720 699 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 VRTNQ9H8Y1 702 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
PHGDH-220ENST00000641570 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 GDAP2Q9NXN4 497 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CACNG4Q9UBN1 327 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
PHGDH-220ENST00000641570 CITO14578 2027 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 TTC3P53804 2025 aa13.86□□□□□ -0.19
PHGDH-220ENST00000641570 MKI67P46013 3256 aaKnown RBP13.86□□□□□ -0.19
PHGDH-220ENST00000641570 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 LINC01553A4QN01 128 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 GRXCR1A8MXD5 290 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms