RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 APOBEC3GQ9HC16 384 aaKnown RBP10.39□□□□□ -0.75
PHGDH-215ENST00000641371 UBN1Q9NPG3 1134 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CISHQ9NSE2 258 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 SLC38A7Q9NVC3 462 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 DPP3Q9NY33 737 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 AMFRQ9UKV5 643 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 PCDHGC3Q9UN70 934 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 GINS2Q9Y248 185 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 CDY2AQ9Y6F7 541 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 SCINQ9Y6U3 715 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 DUSP10Q9Y6W6 482 aa10.39□□□□□ -0.75
PHGDH-215ENST00000641371 MYADML2A6NDP7 307 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 FANCGO15287 622 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 BUB1O43683 1085 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 ABL1P00519 1130 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 CST3P01034 146 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 CYP1A1P04798 512 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 ATP1A1P05023 1023 aaKnown RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 ITGB3P05106 788 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 CYP1A2P05177 515 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 CALB1P05937 261 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 MMEP08473 750 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 NFICP08651 508 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 ZSCAN20P17040 1043 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 CHRNB2P17787 502 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 POLR2BP30876 1174 aaKnown RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 VEGFBP49765 207 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 SNX16P57768 344 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 C1QBPQ07021 282 aaKnown RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 SEZ6Q53EL9 994 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 ALKAL1Q6UXT8 129 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 PEX26Q7Z412 305 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 PHF13Q86YI8 300 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 LRRC57Q8N9N7 239 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 TMEM35BQ8NCS4 154 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 OLIG1Q8TAK6 271 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 SLC35G2Q8TBE7 412 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 SLC20A1Q8WUM9 679 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 HPDLQ96IR7 371 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 RPS6KC1Q96S38 1066 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 OSBPL9Q96SU4 736 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 PPP1R16BQ96T49 567 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 PACSIN1Q9BY11 444 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 SENP6Q9GZR1 1112 aaPredicted RBP10.38□□□□□ -0.75
PHGDH-215ENST00000641371 STRIP2Q9ULQ0 834 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
PHGDH-215ENST00000641371 ARHGEF37A1IGU5 675 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 THAP12O43422 761 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 RECQL4O94761 1208 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 KIF4AO95239 1232 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 UNGP13051 313 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 CAPN2P17655 700 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 CCND3P30281 292 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 GRK4P32298 578 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 CDH5P33151 784 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 SLC1A1P43005 524 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 ASPAP45381 313 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 ACLYP53396 1101 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 MGAT3Q09327 533 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 INCA1Q0VD86 236 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 ITGA7Q13683 1181 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 ZBTB6Q15916 424 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 PTGISQ16647 500 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 WDR72Q3MJ13 1102 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 TWF2Q6IBS0 349 aaKnown RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 SPOPLQ6IQ16 392 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 RSRC2Q7L4I2 434 aaKnown RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 DPH6Q7L8W6 267 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 DAAM2Q86T65 1068 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 FAM228AQ86W67 206 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 UNC93AQ86WB7 457 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 UBL4BQ8N7F7 174 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 RSPH1Q8WYR4 309 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF653Q96CK0 615 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 PGBD4Q96DM1 585 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 TLR10Q9BXR5 811 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 THAP2Q9H0W7 228 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 LHX5Q9H2C1 402 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 CTTNBP2NLQ9P2B4 639 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 WDR35Q9P2L0 1181 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 SIX4Q9UIU6 781 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 BARX2Q9UMQ3 279 aaPredicted RBP10.37□□□□□ -0.75
PHGDH-215ENST00000641371 AGAP1Q9UPQ3 857 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 GIT1Q9Y2X7 761 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 FRMPD3Q5JV73 1810 aa10.37□□□□□ -0.75
PHGDH-215ENST00000641371 TRIP11Q15643 1979 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 TMCO5BA8MYB1 307 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 KBTBD13C9JR72 458 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ENC1O14682 589 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF623O75123 536 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 CSDE1O75534 798 aaKnown RBP10.36□□□□□ -0.75
PHGDH-215ENST00000641371 INHAP05111 366 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 VDRP11473 427 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ELNP15502 786 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ABCB4P21439 1286 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms