RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 TNNC1P63316 161 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 GBP6Q6ZN66 633 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 SPRED2Q7Z698 418 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 TAF4BQ92750 862 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.19■■□□□ 1.32e-18■■■■■ 216.3
TSPAN9-208ENST00000640568 GCNT4Q9P109 453 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 COQ4Q9Y3A0 265 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 ARHGEF37A1IGU5 675 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 LRRC10BA6NIK2 292 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 P4HA1P13674 534 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 FANCCQ00597 558 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 PLCB2Q00722 1185 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 PLCB3Q01970 1234 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 ZNF667Q5HYK9 610 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 SCARA3Q6AZY7 606 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 BCL7CQ8WUZ0 217 aaPredicted RBP23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 PI4K2AQ9BTU6 479 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 SNX9Q9Y5X1 595 aa23.18■■□□□ 1.3
TSPAN9-208ENST00000640568 GTPBP10A4D1E9 387 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 LGALS16A8MUM7 142 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 STAU1O95793 577 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 NOP14P78316 857 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 UBXN1Q04323 297 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 EXOC3L4Q17RC7 722 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 WDR72Q3MJ13 1102 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 TIGD5Q53EQ6 642 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 SEMA4DQ92854 862 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 CRACR2AQ9BSW2 395 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 NXF1Q9UBU9 619 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 VWA8A3KMH1 1905 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 TMEM265A0A087WTH1 108 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 I3L4J1 428 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 SPTLC1O15269 473 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 ASS1P00966 412 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 ODC1P11926 461 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 IGFBP6P24592 240 aaPredicted RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 AARSP49588 968 aaKnown RBP eCLIP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 UBASH3AP57075 661 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 GPM6BQ13491 265 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 FAM171A1Q5VUB5 890 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 CD300LGQ6UXG3 332 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 APTXQ7Z2E3 356 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 DDX53Q86TM3 631 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 EHBP1Q8NDI1 1231 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 SUSD3Q96L08 255 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 SENP8Q96LD8 212 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 MMS19Q96T76 1030 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 XYLT2Q9H1B5 865 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 ZNF576Q9H609 170 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 VRTNQ9H8Y1 702 aa23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 ALG13Q9NP73 1137 aaKnown RBP23.17■■□□□ 1.3
TSPAN9-208ENST00000640568 COL4A4P53420 1690 aaPredicted RBP23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 CYB561D2O14569 222 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 HUS1O60921 280 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 TPM3P06753 285 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 UBE3AQ05086 875 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 BMS1Q14692 1282 aaKnown RBP23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 SPOPLQ6IQ16 392 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 KIAA1841Q6NSI8 718 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 CEP57Q86XR8 500 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 PCMTD1Q96MG8 357 aaPredicted RBP23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 NT5C1BQ96P26 610 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 GPR62Q9BZJ7 368 aa23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 INTS2Q9H0H0 1204 aaKnown RBP23.16■■□□□ 1.3
TSPAN9-208ENST00000640568 TSC2P49815 1807 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 H3BNC9 293 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 SOD2P04179 222 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 LRMPQ12912 555 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 USP41Q3LFD5 358 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 ZNF697Q5TEC3 545 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 VPS52Q8N1B4 723 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 APPL2Q8NEU8 664 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 POF1BQ8WVV4 589 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 HERC2P3Q9BVR0 1158 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 GDAP2Q9NXN4 497 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 DSEQ9UL01 958 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 PCDHB8Q9UN66 801 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 LZTS1Q9Y250 596 aa23.15■■□□□ 1.3
TSPAN9-208ENST00000640568 MYO9BQ13459 2157 aa23.14■■□□□ 1.3
TSPAN9-208ENST00000640568 A0A1B0GTH6 734 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 M0QZQ0 153 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 SYN3O14994 580 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 CBFA2T2O43439 604 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 LRRN2O75325 713 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 CA8P35219 290 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 SCARA5Q6ZMJ2 495 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 METTL23Q86XA0 190 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 ELMO3Q96BJ8 720 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 RTN4Q9NQC3 1192 aaKnown RBP23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 IFNKQ9P0W0 207 aa23.14■■□□□ 1.29
TSPAN9-208ENST00000640568 SOX1O00570 391 aaPredicted RBP23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 CSPG5O95196 566 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 URODP06132 367 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 TKTP29401 623 aaKnown RBP23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 TOP6BLQ8N6T0 577 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 SPPL3Q8TCT6 385 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 GDPD5Q8WTR4 605 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 TTPALQ9BTX7 342 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 NIF3L1Q9GZT8 377 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms