RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MALP21145 153 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 SIM1P81133 766 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-216ENST00000640058 MC2RQ01718 297 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 FPGSQ05932 587 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 ZNF844Q08AG5 666 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 ZNF169Q14929 603 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-216ENST00000640058 PREPLQ4J6C6 727 aaPredicted RBP6.34□□□□□ -1.39
CCDC7-216ENST00000640058 FBXO42Q6P3S6 717 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 SLC4A10Q6U841 1118 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 CLNKQ7Z7G1 428 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 TTC7BQ86TV6 843 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 PRIMA1Q86XR5 153 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 MIER2Q8N344 545 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 PDPRQ8NCN5 879 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 NSUN6Q8TEA1 469 aaKnown RBP6.34□□□□□ -1.39
CCDC7-216ENST00000640058 FBXO41Q8TF61 875 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 SLC13A1Q9BZW2 595 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 SLAMF7Q9NQ25 335 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 CALCOCO1Q9P1Z2 691 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 CTTNBP2NLQ9P2B4 639 aa6.34□□□□□ -1.39
CCDC7-216ENST00000640058 CFAP20Q9Y6A4 193 aaKnown RBP6.34□□□□□ -1.39
CCDC7-216ENST00000640058 PRAMEF33A0A0G2JMD5 474 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 F2RL2O00254 374 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 PEX1O43933 1283 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 PRAMEF10O60809 474 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 RPLP2P05387 115 aaKnown RBP6.33□□□□□ -1.4
CCDC7-216ENST00000640058 PSMC1P62191 440 aaKnown RBP6.33□□□□□ -1.4
CCDC7-216ENST00000640058 DSC2Q02487 901 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 SNAPC2Q13487 334 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 CFAP52Q8N1V2 620 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 BOLLQ8N9W6 283 aaKnown RBP6.33□□□□□ -1.4
CCDC7-216ENST00000640058 CAGE1Q8TC20 777 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 SLC9A6Q92581 669 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 DUSP26Q9BV47 211 aa6.33□□□□□ -1.4
CCDC7-216ENST00000640058 A0A1W2PS29 197 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 E9PLN8 166 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 SUN1O94901 812 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 SNUPNO95149 360 aaKnown RBP6.32□□□□□ -1.4
CCDC7-216ENST00000640058 CCDC93Q567U6 631 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 SP5Q6BEB4 398 aaPredicted RBP6.32□□□□□ -1.4
CCDC7-216ENST00000640058 TAPT1Q6NXT6 567 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 SLC30A10Q6XR72 485 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 ARHGEF25Q86VW2 580 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 ADGRG5Q8IZF4 528 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 LNX2Q8N448 690 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 TOR1AIP2Q8NFQ8 470 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 SLC30A5Q8TAD4 765 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
CCDC7-216ENST00000640058 LRIG1Q96JA1 1093 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 VKORC1Q9BQB6 163 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 ALG13Q9NP73 1137 aaKnown RBP6.32□□□□□ -1.4
CCDC7-216ENST00000640058 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 HOMER2Q9NSB8 354 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 FOXJ2Q9P0K8 574 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
CCDC7-216ENST00000640058 CCDC195A0A1B0GUA6 201 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 ZNF785A8K8V0 405 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 GATA3P23771 443 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 SMARCA1P28370 1054 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 PHKA1P46020 1223 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 RECQLP46063 649 aaPredicted RBP6.31□□□□□ -1.4
CCDC7-216ENST00000640058 RPS7P62081 194 aaKnown RBP6.31□□□□□ -1.4
CCDC7-216ENST00000640058 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
CCDC7-216ENST00000640058 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
CCDC7-216ENST00000640058 LPIN2Q92539 896 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 C1orf43Q9BWL3 253 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 INTS13Q9NVM9 706 aa6.31□□□□□ -1.4
CCDC7-216ENST00000640058 NT5C1B-RDH14C9J2C7 533 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 MASP2O00187 686 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 YY2O15391 372 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 RARRES1P49788 294 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 DYRK1AQ13627 763 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 PTPROQ16827 1216 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 ZNF362Q5T0B9 420 aaPredicted RBP6.3□□□□□ -1.4
CCDC7-216ENST00000640058 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
CCDC7-216ENST00000640058 TFAP2BQ92481 460 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 SNX19Q92543 992 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 FBXL20Q96IG2 436 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 TRIB1Q96RU8 372 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 SMOQ99835 787 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 BRD9Q9H8M2 597 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 IL17RBQ9NRM6 502 aa6.3□□□□□ -1.4
CCDC7-216ENST00000640058 IL33O95760 270 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 CHRM2P08172 466 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 GNAI3P08754 354 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 PPP3CBP16298 524 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 PDCP20941 246 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 ANXA11P50995 505 aaKnown RBP6.29□□□□□ -1.4
CCDC7-216ENST00000640058 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC7-216ENST00000640058 GNAI1P63096 354 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 MRPS21P82921 87 aaKnown RBP6.29□□□□□ -1.4
CCDC7-216ENST00000640058 PIGFQ07326 219 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 VWA1Q6PCB0 445 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 CATIPQ7Z7H3 387 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 ZBTB46Q86UZ6 589 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 C3orf20Q8ND61 904 aa6.29□□□□□ -1.4
CCDC7-216ENST00000640058 RGMAQ96B86 450 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms