RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 GRHL1Q9NZI5 618 aa22.91■■□□□ 1.26
CLN6-224ENST00000638076 CWC15Q9P013 229 aaKnown RBP22.91■■□□□ 1.26
CLN6-224ENST00000638076 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.91■■□□□ 1.26
CLN6-224ENST00000638076 LOC102724159A0A0B4J2E5 919 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 FNTAP49354 379 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 GNGT1P63211 74 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 IGBP1P78318 339 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 PTP4A2Q12974 167 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 PWP2Q15269 919 aaKnown RBP22.9■■□□□ 1.26
CLN6-224ENST00000638076 GJC2Q5T442 439 aaPredicted RBP22.9■■□□□ 1.26
CLN6-224ENST00000638076 LDLRAD1Q5T700 205 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 TTC19Q6DKK2 380 aaPredicted RBP22.9■■□□□ 1.26
CLN6-224ENST00000638076 CEP120Q8N960 986 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 NIF3L1Q9GZT8 377 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 ERAP1Q9NZ08 941 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 TMEM191BP0C7N4 346 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 NR1D1P20393 614 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 C1QBPQ07021 282 aaKnown RBP22.9■■□□□ 1.26
CLN6-224ENST00000638076 ZNF394Q53GI3 561 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 EEF1DP3Q658K8 133 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 PLEKHA7Q6IQ23 1121 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 FOXR1Q6PIV2 292 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 DDX27Q96GQ7 796 aaKnown RBP22.9■■□□□ 1.26
CLN6-224ENST00000638076 LRRC19Q9H756 370 aa22.9■■□□□ 1.26
CLN6-224ENST00000638076 MBTD1Q05BQ5 628 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 SGO2Q562F6 1265 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 PPP1R2P3Q6NXS1 205 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 KDM7AQ6ZMT4 941 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 SLC10A4Q96EP9 437 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 CISHQ9NSE2 258 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 PNMA3Q9UL41 463 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 SCINQ9Y6U3 715 aa22.89■■□□□ 1.25
CLN6-224ENST00000638076 C22orf31O95567 290 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 ARHGAP1Q07960 439 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 C1orf54Q8WWF1 131 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 GRIN2DO15399 1336 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 TLR3O15455 904 aaKnown RBP22.88■■□□□ 1.25
CLN6-224ENST00000638076 ASAP2O43150 1006 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 GJB6O95452 261 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 IQCF3P0C7M6 154 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 GPRC5AQ8NFJ5 357 aa22.88■■□□□ 1.25
CLN6-224ENST00000638076 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.88■■□□□ 1.25
CLN6-224ENST00000638076 WEE2P0C1S8 567 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 INSRRP14616 1297 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 BRD2P25440 801 aaKnown RBP22.87■■□□□ 1.25
CLN6-224ENST00000638076 GBP1P32455 592 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 ZNF699Q32M78 642 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 SPDYCQ5MJ68 293 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 SCARA5Q6ZMJ2 495 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 RUFY4Q6ZNE9 571 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 ANKRD36BP1Q96IX9 119 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 PARVAQ9NVD7 372 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 PARP2Q9UGN5 583 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 PASKQ96RG2 1323 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 O00370 1275 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 EIF3HO15372 352 aaKnown RBP eCLIP22.87■■□□□ 1.25
CLN6-224ENST00000638076 B4GALT4O60513 344 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 ECEL1O95672 775 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 TNNC2P02585 160 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 LGALS2P05162 132 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 MMP8P22894 467 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 PDCLQ13371 301 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 LAMC2Q13753 1193 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 EMC10Q5UCC4 262 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 TAPT1Q6NXT6 567 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 TMEM192Q8IY95 271 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 HERPUD2Q9BSE4 406 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 CDT1Q9H211 546 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 TNFSF13BQ9Y275 285 aa22.87■■□□□ 1.25
CLN6-224ENST00000638076 CXCL8P10145 99 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 ADORA2AP29274 412 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 PMS2P54278 862 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 TAS2R40P59535 323 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 SNX1Q13596 522 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 ZNF792Q3KQV3 632 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 RHOT1Q8IXI2 618 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 FEZF2Q8TBJ5 459 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 XYLT2Q9H1B5 865 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 IFT122Q9HBG6 1241 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 USTQ9Y2C2 406 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 A6NNZ2 444 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 PSTPIP1O43586 416 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 CSDE1O75534 798 aaKnown RBP22.86■■□□□ 1.25
CLN6-224ENST00000638076 CCNA1P78396 465 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 PPP1R7Q15435 360 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 TUBB8Q3ZCM7 444 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 ZNF484Q5JVG2 852 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 CCDC50Q8IVM0 306 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 PPP1R16BQ96T49 567 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 CHST7Q9NS84 486 aa22.86■■□□□ 1.25
CLN6-224ENST00000638076 PPFIA4O75335 1185 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 ASPAP45381 313 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 GTF3C2Q8WUA4 911 aaPredicted RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 MAIP1Q8WWC4 291 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 ATG4AQ8WYN0 398 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 NFKBIZQ9BYH8 718 aa22.85■■□□□ 1.25
CLN6-224ENST00000638076 RPF1Q9H9Y2 349 aaKnown RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 PRMT7Q9NVM4 692 aaPredicted RBP22.85■■□□□ 1.25
CLN6-224ENST00000638076 BCCIPQ9P287 314 aaKnown RBP eCLIP22.85■■□□□ 1.25
CLN6-224ENST00000638076 MTRF1LQ9UGC7 380 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms