RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MYADMQ96S97 322 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 PCIF1Q9H4Z3 704 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 CYP4F11Q9HBI6 524 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 IGSF9Q9P2J2 1179 aa14.95□□□□□ -0.02
PNKP-228ENST00000637325 TIMM13Q9Y5L4 95 aaPredicted RBP14.95□□□□□ -0.02
PNKP-228ENST00000637325 MUC6Q6W4X9 2439 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 GOLGA8IPA6NC78 632 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 GOLGA8JA6NMD2 632 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 PPEF2O14830 753 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 EXTL3O43909 919 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 TBC1D4O60343 1298 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 ABLIM3O94929 683 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 ODC1P11926 461 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 ATF2P15336 505 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 AARSP49588 968 aaKnown RBP eCLIP14.94□□□□□ -0.02
PNKP-228ENST00000637325 NTHL1P78549 312 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 TDGQ13569 410 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 FAM26FQ5R3K3 315 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 TPGS2Q68CL5 300 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 CNNM4Q6P4Q7 775 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 UNC13DQ70J99 1090 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 BMP8AQ7Z5Y6 402 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 NT5DC4Q86YG4 428 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 BRSK2Q8IWQ3 736 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 CACTINQ8WUQ7 758 aaKnown RBP14.94□□□□□ -0.02
PNKP-228ENST00000637325 LEO1Q8WVC0 666 aaPredicted RBP14.94□□□□□ -0.02
PNKP-228ENST00000637325 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 CBWD1Q9BRT8 395 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 OXCT2Q9BYC2 517 aaPredicted RBP14.94□□□□□ -0.02
PNKP-228ENST00000637325 BLZF1Q9H2G9 400 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 KCNK12Q9HB15 430 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 RBAKQ9NYW8 714 aaPredicted RBP14.94□□□□□ -0.02
PNKP-228ENST00000637325 EPS15L1Q9UBC2 864 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 SERTAD1Q9UHV2 236 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 ZDHHC9Q9Y397 364 aa14.94□□□□□ -0.02
PNKP-228ENST00000637325 OR6C75A6NL08 312 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 PIRO00625 290 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 KIAA0391O15091 583 aaKnown RBP14.93□□□□□ -0.02
PNKP-228ENST00000637325 EIF3DO15371 548 aaKnown RBP eCLIP14.93□□□□□ -0.02
PNKP-228ENST00000637325 N4BP1O75113 896 aaKnown RBP14.93□□□□□ -0.02
PNKP-228ENST00000637325 OAZ2O95190 189 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 POU2F2P09086 479 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 LAMP2P13473 410 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 TYMPP19971 482 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 TAF6P49848 677 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 TFAMQ00059 246 aaKnown RBP14.93□□□□□ -0.02
PNKP-228ENST00000637325 ADCY1Q08828 1119 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 OVOS1Q6IE37 1185 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 METTL23Q86XA0 190 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 EFCAB13Q8IY85 973 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 GPD1LQ8N335 351 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 ELMOD1Q8N336 334 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 GLIS3Q8NEA6 775 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 ZSWIM2Q8NEG5 633 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 SMOC2Q9H3U7 446 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 AFF4Q9UHB7 1163 aaKnown RBP14.93□□□□□ -0.02
PNKP-228ENST00000637325 ZFP37Q9Y6Q3 630 aaPredicted RBP14.93□□□□□ -0.02
PNKP-228ENST00000637325 TSC2P49815 1807 aa14.93□□□□□ -0.02
PNKP-228ENST00000637325 ZNF638Q14966 1978 aaKnown RBP14.93□□□□□ -0.02
PNKP-228ENST00000637325 A0A1B0GVL5 298 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 ANO9A1A5B4 782 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 SLFN14P0C7P3 912 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 PTPN2P17706 415 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 CMA1P23946 247 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 CASP1P29466 404 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 CUL4BQ13620 913 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 PABPC1LQ4VXU2 614 aaKnown RBP14.92□□□□□ -0.02
PNKP-228ENST00000637325 TCEAL8Q8IYN2 117 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 GRAMD1CQ8IYS0 662 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 ZNF507Q8TCN5 953 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 NXPE3Q969Y0 559 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 ASIC4Q96FT7 647 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 ZNF560Q96MR9 790 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 SCAND2PQ9GZW5 306 aaPredicted RBP14.92□□□□□ -0.02
PNKP-228ENST00000637325 HCFC1R1Q9NWW0 138 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 DNMT3BQ9UBC3 853 aaKnown RBP14.92□□□□□ -0.02
PNKP-228ENST00000637325 USP25Q9UHP3 1055 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 DSEQ9UL01 958 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 MAFFQ9ULX9 164 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 MRPS23Q9Y3D9 190 aaKnown RBP14.92□□□□□ -0.02
PNKP-228ENST00000637325 R3HCC1Q9Y3T6 440 aaKnown RBP14.92□□□□□ -0.02
PNKP-228ENST00000637325 INSL5Q9Y5Q6 135 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 UBE4BO95155 1302 aa14.92□□□□□ -0.02
PNKP-228ENST00000637325 KMT2EQ8IZD2 1858 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 PVALEFA0A1B0GWK0 134 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 CYB561D2O14569 222 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 SPTLC1O15269 473 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 SEC24AO95486 1093 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 PFKFB1P16118 471 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 SV2CQ496J9 727 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 RNF19BQ6ZMZ0 732 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 NELFCDQ8IXH7 590 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 THEM5Q8N1Q8 247 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 FBXL6Q8N531 539 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 ITFG1Q8TB96 612 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 RSAD2Q8WXG1 361 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 FAM122AQ96E09 287 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 CHAMP1Q96JM3 812 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 PGLYRP2Q96PD5 576 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms