RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CDV3Q9UKY7 258 aaKnown RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 ZMYND8Q9ULU4 1186 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-205ENST00000636792 INSL6Q9Y581 213 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 SLC4A7Q9Y6M7 1214 aa7.27□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM265A0A087WTH1 108 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 LRRC10BA6NIK2 292 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ZBBXA8MT70 800 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TISP43B9A030 160 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 CLIC2O15247 247 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ADAM23O75077 832 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ZC3H11AO75152 810 aaKnown RBP eCLIP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 DGKIO75912 1065 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TNNC2P02585 160 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 THP07101 528 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM191BP0C7N4 346 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 CXCL8P10145 99 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 HARSP12081 509 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SYN1P17600 705 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 LAG3P18627 525 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 RFX1P22670 979 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 LRPAP1P30533 357 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 PPM1AP35813 382 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 MLH1P40692 756 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 CTSOP43234 321 aaPredicted RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ACOT2P49753 483 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 DSC1Q08554 894 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM132DQ14C87 1099 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 NCAPHQ15003 741 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 RAB30Q15771 203 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ZBTB6Q15916 424 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 UVSSAQ2YD98 709 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SLC10A6Q3KNW5 377 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TCP11X2Q5H9J9 407 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 NOMO2Q5JPE7 1267 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 AGMOQ6ZNB7 445 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ZBTB33Q86T24 672 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 RTN4RL1Q86UN2 441 aaPredicted RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 CBWD2Q8IUF1 395 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 FMNL3Q8IVF7 1028 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 DHX40Q8IX18 779 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TDHQ8IZJ6 230 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 LRRC52Q8N7C0 313 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 CEP120Q8N960 986 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SPATA18Q8TC71 538 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TAF4BQ92750 862 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SLC35C1Q96A29 364 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SAAL1Q96ER3 474 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ZBTB45Q96K62 511 aaPredicted RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 RNPC3Q96LT9 517 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 ZNF560Q96MR9 790 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 PPP1R10Q96QC0 940 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 MED15Q96RN5 788 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SRRTQ9BXP5 876 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 UBE2OQ9C0C9 1292 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM8AQ9HCN3 771 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 SNTG2Q9NY99 539 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 PARP2Q9UGN5 583 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 LIMA1Q9UHB6 759 aaKnown RBP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.26□□□□□ -1.25
UPF3B-205ENST00000636792 TSC2P49815 1807 aa7.26□□□□□ -1.25
UPF3B-205ENST00000636792 DNAH12Q6ZR08 3092 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 SMIM28A0A1B0GU29 152 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 ARL5CA6NH57 179 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 KCNJ18B7U540 433 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 CBFA2T2O43439 604 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 OFD1O75665 1012 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 CELA2BP08218 269 aaPredicted RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 FAM163BP0C2L3 166 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 ATICP31939 592 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 RPL9P32969 192 aaKnown RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 TNFSF9P41273 254 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 MTIF2P46199 727 aaKnown RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 CASP4P49662 377 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 MXI1P50539 228 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 STX17P56962 302 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 SMAD3P84022 425 aaKnown RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 RELBQ01201 579 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 ELAVL2Q12926 359 aaKnown RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 TUSC3Q13454 348 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 KCNJ12Q14500 433 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 PLA2G4EQ3MJ16 856 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 ZACNQ401N2 412 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 FILIP1LQ4L180 1135 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 CLLU1OSQ5K130 101 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 FKBP15Q5T1M5 1219 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 KRT39Q6A163 491 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 SARM1Q6SZW1 724 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 C15orf39Q6ZRI6 1047 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 C16orf59Q7L2K0 433 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 OTOP2Q7RTS6 562 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 HERC6Q8IVU3 1022 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 GPR65Q8IYL9 337 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 TTC39CQ8N584 583 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 INSM2Q96T92 566 aaPredicted RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 YME1L1Q96TA2 773 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 RAD9AQ99638 391 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms