RNA–Protein interactions for RNA: ENST00000636257.1

SPTAN1-230, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-230ENST00000636257 LRRC3Q9BY71 257 aa13.74□□□□□ -0.21
SPTAN1-230ENST00000636257 POLMQ9NP87 494 aaPredicted RBP13.74□□□□□ -0.21
SPTAN1-230ENST00000636257 DNAAF2Q9NVR5 837 aaKnown RBP13.74□□□□□ -0.21
SPTAN1-230ENST00000636257 PPME1Q9Y570 386 aa13.74□□□□□ -0.21
SPTAN1-230ENST00000636257 PCDHB9Q9Y5E1 797 aa13.74□□□□□ -0.21
SPTAN1-230ENST00000636257 HELZP42694 1942 aaKnown RBP13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 SH2B2O14492 632 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 PSMD10O75832 226 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 B3GAT3O94766 335 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 CFIP05156 583 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 RFC5P40937 340 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 PTGER3P43115 390 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 ARPP19P56211 112 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 MBTD1Q05BQ5 628 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 SLC14A1Q13336 389 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 CASC1Q6TDU7 716 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 CD300LGQ6UXG3 332 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 CDR2LQ86X02 465 aaPredicted RBP13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 TMC8Q8IU68 726 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 ZNF579Q8NAF0 562 aaKnown RBP13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 CNOT6LQ96LI5 555 aaKnown RBP13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 FBRSL1Q9HCM7 1045 aaKnown RBP13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 FSCN3Q9NQT6 498 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 PILRBQ9UKJ0 227 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 MAFFQ9ULX9 164 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 SLC6A14Q9UN76 642 aa13.73□□□□□ -0.21
SPTAN1-230ENST00000636257 ZNF638Q14966 1978 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 UBR5O95071 2799 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 A0A1B0GUA9 196 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 TRABD2BA6NFA1 517 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 B4GALT5O43286 388 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 SH3BP5O60239 455 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 WEE1P30291 646 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 MCM2P49736 904 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 PSMC5P62195 406 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 HNRNPUQ00839 825 aaKnown RBP eCLIP13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 RUNX3Q13761 415 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 SPDYCQ5MJ68 293 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 ARMCX6Q7L4S7 300 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 GLRX5Q86SX6 157 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 GJA10Q969M2 543 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 CAPN10Q9HC96 672 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 HPS4Q9NQG7 708 aa13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 THG1LQ9NWX6 298 aaKnown RBP13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-230ENST00000636257 ATXN2Q99700 1313 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 DENND4CQ5VZ89 1909 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 OTOL1A6NHN0 477 aaPredicted RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 I3L4J1 428 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 ADAMTS3O15072 1205 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 PRC1O43663 620 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 PRAMEF12O95522 483 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 SERPINF2P08697 491 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 ITPKBP27987 946 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 LIFRP42702 1097 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 AMPD2Q01433 879 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 FUT2Q10981 343 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 MXD4Q14582 209 aaPredicted RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 DUOXA1Q1HG43 343 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 LYSMD4Q5XG99 296 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 SLCO6A1Q86UG4 719 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 NAXDQ8IW45 347 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 TMEFF1Q8IYR6 380 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 REXO1Q8N1G1 1221 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 OLIG1Q8TAK6 271 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 CEP76Q8TAP6 659 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 CEP170P1Q96L14 293 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 FNBP1Q96RU3 617 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 FAM83CQ9BQN1 747 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 AFF4Q9UHB7 1163 aaKnown RBP13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 SLC12A7Q9Y666 1083 aa13.71□□□□□ -0.21
SPTAN1-230ENST00000636257 COL5A1P20908 1838 aaPredicted RBP13.71□□□□□ -0.22
SPTAN1-230ENST00000636257 TEX51A0A1B0GUA7 166 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 H7C4K7 107 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 GJB3O75712 270 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 ITPKAP23677 461 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 P2RY2P41231 377 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 BRCC3P46736 316 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 GALK1P51570 392 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 CLCNKBP51801 687 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 CAMK2BQ13554 666 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 EMC2Q15006 297 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 UPP1Q16831 310 aa13.7□□□□□ -0.22
SPTAN1-230ENST00000636257 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms