RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SPATA1Q5VX52 437 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 CCDC105Q8IYK2 499 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 MCRS1Q96EZ8 462 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 ZNF396Q96N95 335 aaPredicted RBP19.44■□□□□ 0.7
PNKP-225ENST00000636214 FIZ1Q96SL8 496 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 ASB7Q9H672 318 aa19.44■□□□□ 0.7
PNKP-225ENST00000636214 AVENQ9NQS1 362 aaPredicted RBP19.44■□□□□ 0.7
PNKP-225ENST00000636214 TIMM13Q9Y5L4 95 aaPredicted RBP19.44■□□□□ 0.7
PNKP-225ENST00000636214 NOTCH4Q99466 2003 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 KRBA1A5PL33 1030 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 FAM189A1O60320 539 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 OAZ2O95190 189 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 GCNT3O95395 438 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 ACOT2P49753 483 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 TWF1Q12792 350 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 ZBTB6Q15916 424 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 OVOS1Q6IE37 1185 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 SLC39A4Q6P5W5 647 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 ZNF720Q7Z2F6 126 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 HSCBQ8IWL3 235 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 SYCP3Q8IZU3 236 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 LEMD2Q8NC56 503 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 ACCSQ96QU6 501 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 KXD1Q9BQD3 176 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 ASAH2Q9NR71 780 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 TBC1D7Q9P0N9 293 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 PCDHB13Q9Y5F0 798 aa19.43■□□□□ 0.7
PNKP-225ENST00000636214 MORC2Q9Y6X9 1032 aaPredicted RBP19.43■□□□□ 0.7
PNKP-225ENST00000636214 ZFHX2Q9C0A1 2572 aaPredicted RBP19.42■□□□□ 0.7
PNKP-225ENST00000636214 PTPRZ1P23471 2315 aaPredicted RBP19.42■□□□□ 0.7
PNKP-225ENST00000636214 ANKRD63C9JTQ0 380 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 PI15O43692 258 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 SEC24AO95486 1093 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 NFICP08651 508 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 TYMPP19971 482 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 AARSP49588 968 aaKnown RBP eCLIP19.42■□□□□ 0.7
PNKP-225ENST00000636214 GPC5P78333 572 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 ALCAMQ13740 583 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 PHLDB3Q6NSJ2 640 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 RNF19BQ6ZMZ0 732 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 DTWD2Q8NBA8 298 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 RPP25Q9BUL9 199 aaKnown RBP19.42■□□□□ 0.7
PNKP-225ENST00000636214 PANK2Q9BZ23 570 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 LRRC27Q9C0I9 530 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 C2CD2Q9Y426 696 aa19.42■□□□□ 0.7
PNKP-225ENST00000636214 MYMKA6NI61 221 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 GFRA3O60609 400 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 IL18RAPO95256 599 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 ADRB2P07550 413 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 CEBPBP17676 345 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 LILRA4P59901 499 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 POU5F1Q01860 360 aaKnown RBP19.41■□□□□ 0.7
PNKP-225ENST00000636214 SLC5A9Q2M3M2 681 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 L1TD1Q5T7N2 865 aaKnown RBP19.41■□□□□ 0.7
PNKP-225ENST00000636214 STXBP4Q6ZWJ1 553 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 METTL23Q86XA0 190 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 PDILTQ8N807 584 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 SENP8Q96LD8 212 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 DSEQ9UL01 958 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 SIT1Q9Y3P8 196 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 YIPF1Q9Y548 306 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 STYXL1Q9Y6J8 313 aa19.41■□□□□ 0.7
PNKP-225ENST00000636214 RIF1Q5UIP0 2472 aaKnown RBP19.41■□□□□ 0.7
PNKP-225ENST00000636214 TISP43B9A030 160 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 SPTLC2O15270 562 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 ECI2O75521 394 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 MYL4P12829 197 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 ALDH1A3P47895 512 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 NASPP49321 788 aaPredicted RBP19.4■□□□□ 0.7
PNKP-225ENST00000636214 TAF6P49848 677 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 EPHB3P54753 998 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 PRKCQQ04759 706 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 MYBPC2Q14324 1141 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 ANGPT1Q15389 498 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 MLF2Q15773 248 aaPredicted RBP19.4■□□□□ 0.7
PNKP-225ENST00000636214 C9orf57Q5W0N0 161 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 CCDC65Q8IXS2 484 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 TMEM130Q8N3G9 435 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 NOC3LQ8WTT2 800 aaKnown RBP19.4■□□□□ 0.7
PNKP-225ENST00000636214 ZNF560Q96MR9 790 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 PGLYRP2Q96PD5 576 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 SLITRK6Q9H5Y7 841 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 OLFML3Q9NRN5 406 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 PANK4Q9NVE7 773 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 DPP3Q9NY33 737 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 TCHHQ07283 1943 aa19.4■□□□□ 0.7
PNKP-225ENST00000636214 PPEF2O14830 753 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 MICAL2O94851 1124 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 LDHAP00338 332 aaKnown RBP19.39■□□□□ 0.69
PNKP-225ENST00000636214 OR4Q2P0C623 313 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 PDIA4P13667 645 aaKnown RBP19.39■□□□□ 0.69
PNKP-225ENST00000636214 GPR17Q13304 367 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 SNW1Q13573 536 aaKnown RBP19.39■□□□□ 0.69
PNKP-225ENST00000636214 NT5DC4Q86YG4 428 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 DNAJC19Q96DA6 116 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 ZFP14Q9HCL3 533 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 ANK1P16157 1881 aa19.39■□□□□ 0.69
PNKP-225ENST00000636214 FAM186AA6NE01 2351 aa19.38■□□□□ 0.69
PNKP-225ENST00000636214 PPP1R37O75864 691 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms