RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ITIH3Q06033 890 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
PNKP-224ENST00000631020 LMBRD2Q68DH5 695 aaPredicted RBP20.15■□□□□ 0.82
PNKP-224ENST00000631020 LLGL2Q6P1M3 1020 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 ZNF516Q92618 1163 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 LRFN3Q9BTN0 628 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 NAT10Q9H0A0 1025 aaKnown RBP20.15■□□□□ 0.82
PNKP-224ENST00000631020 SAMSN1Q9NSI8 373 aaKnown RBP20.15■□□□□ 0.82
PNKP-224ENST00000631020 SSX2IPQ9Y2D8 614 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 NFE2L3Q9Y4A8 694 aa20.15■□□□□ 0.82
PNKP-224ENST00000631020 LRRIQ3A6PVS8 624 aaPredicted RBP20.14■□□□□ 0.81
PNKP-224ENST00000631020 SOD2P04179 222 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 DLATP10515 647 aaKnown RBP20.14■□□□□ 0.81
PNKP-224ENST00000631020 VAMP7P51809 220 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 GUCY2FP51841 1108 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 CLDN10P78369 228 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 TMEM132DQ14C87 1099 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 IQCB1Q15051 598 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 TPD52L1Q16890 204 aaPredicted RBP20.14■□□□□ 0.81
PNKP-224ENST00000631020 SCARA3Q6AZY7 606 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 INTS8Q75QN2 995 aaKnown RBP20.14■□□□□ 0.81
PNKP-224ENST00000631020 DHX40Q8IX18 779 aaKnown RBP20.14■□□□□ 0.81
PNKP-224ENST00000631020 RNF168Q8IYW5 571 aaPredicted RBP20.14■□□□□ 0.81
PNKP-224ENST00000631020 AOPEPQ8N6M6 819 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 OR5B17Q8NGF7 314 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 TMC2Q8TDI7 906 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 TSPAN18Q96SJ8 248 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 GOLGA2P5Q9HBQ8 144 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 FANCLQ9NW38 375 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 MARCH5Q9NX47 278 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 TUBGCP4Q9UGJ1 667 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 DERAQ9Y315 318 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 C2CD2Q9Y426 696 aa20.14■□□□□ 0.81
PNKP-224ENST00000631020 LILRB3O75022 631 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 FGFR1OPO95684 399 aaKnown RBP20.13■□□□□ 0.81
PNKP-224ENST00000631020 IGFBP6P24592 240 aaPredicted RBP20.13■□□□□ 0.81
PNKP-224ENST00000631020 MARSP56192 900 aaKnown RBP20.13■□□□□ 0.81
PNKP-224ENST00000631020 MYL5Q02045 173 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 BFSP1Q12934 665 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 TUSC3Q13454 348 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 SURF1Q15526 300 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 HSP90AA4PQ58FG1 418 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 FRMD5Q7Z6J6 570 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 RNF135Q8IUD6 432 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 GPR65Q8IYL9 337 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 AUTS2Q8WXX7 1259 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 RABGGTAQ92696 567 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 NECTIN4Q96NY8 510 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 PAAF1Q9BRP4 392 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 HERC2P3Q9BVR0 1158 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 COLEC11Q9BWP8 271 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 EMILIN2Q9BXX0 1053 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 HSD3B7Q9H2F3 369 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 ADAM7Q9H2U9 754 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 THAP9Q9H5L6 903 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 MRPL17Q9NRX2 175 aaKnown RBP20.13■□□□□ 0.81
PNKP-224ENST00000631020 INTS13Q9NVM9 706 aa20.13■□□□□ 0.81
PNKP-224ENST00000631020 PDCD11Q14690 1871 aaKnown RBP20.13■□□□□ 0.81
PNKP-224ENST00000631020 PRR33A8MZF0 331 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CA8P35219 290 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 OR1G1P47890 313 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 TFAMQ00059 246 aaKnown RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 CCDC40Q4G0X9 1142 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CES5AQ6NT32 575 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 SLC22A17Q8WUG5 538 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 FNBP1Q96RU3 617 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CGRRF1Q99675 332 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 TSPY26PQ9H489 355 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CBX8Q9HC52 389 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 SLC38A7Q9NVC3 462 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 ARMCX3Q9UH62 379 aaPredicted RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 UBQLN1Q9UMX0 589 aaKnown RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 PRG3Q9Y2Y8 225 aaPredicted RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 CASTOR2A6NHX0 329 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 IKBKBO14920 756 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 GNA14O95837 355 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 TRIM49P0CI25 452 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 TRIM49CP0CI26 452 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 KRT13P13646 458 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 TNNI1P19237 187 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CDKAL1Q5VV42 579 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 NT5DC4Q86YG4 428 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 WDR49Q8IV35 697 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CXorf38Q8TB03 319 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 CNOT6LQ96LI5 555 aaKnown RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 MTMR12Q9C0I1 747 aa20.12■□□□□ 0.81
PNKP-224ENST00000631020 METTL14Q9HCE5 456 aaKnown RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 ARIH1Q9Y4X5 557 aaPredicted RBP20.12■□□□□ 0.81
PNKP-224ENST00000631020 F8W810 466 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 C1RP00736 705 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 URODP06132 367 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 CYP3A5P20815 502 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 ENPEPQ07075 957 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 PPP3CAQ08209 521 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 TRIM59Q8IWR1 403 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 KLHL5Q96PQ7 755 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 DPP3Q9NY33 737 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 TRIOO75962 3097 aa20.11■□□□□ 0.81
PNKP-224ENST00000631020 CAVIN2O95810 425 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 CNPP09543 421 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms