RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 STK33Q9BYT3 514 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 NAGPAQ9UK23 515 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 MAP2P11137 1827 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 TCP11X1B4DZS4 312 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ALDH1A2O94788 518 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 NPTXRO95502 500 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 NDUFB10O96000 172 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 IMPDH2P12268 514 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 HSPA9P38646 679 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 RGS4P49798 205 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 KDSRQ06136 332 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ZNF543Q08ER8 600 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 TKFCQ3LXA3 575 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 NOTUMQ6P988 496 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 IPMKQ8NFU5 416 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 SLITRK1Q96PX8 696 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ENTPD7Q9NQZ7 604 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ANKRD65E5RJM6 399 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 PDXKO00764 312 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 KRT8P05787 483 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 GSNP06396 782 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 WEE2P0C1S8 567 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 VCAM1P19320 739 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 STOML1Q9UBI4 398 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ZNF70Q9UC06 446 aaPredicted RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ANO9A1A5B4 782 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 MYL2P10916 166 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 INPP5AQ14642 412 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 SMTNL2Q2TAL5 461 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 CLEC4FQ8N1N0 589 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 WDR35Q9P2L0 1181 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 UBXN8O00124 270 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 HUNKP57058 714 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 HPCAP84074 193 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 PDIA5Q14554 519 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CNGA3Q16281 694 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ATP1A1P05023 1023 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CETPP11597 493 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 KHDRBS2Q5VWX1 349 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 MRPL1Q9BYD6 325 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 AAASQ9NRG9 546 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 MAFGO15525 162 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CYP2C9P11712 490 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ACADSBP45954 432 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 HIC1Q14526 733 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 PRR12Q9ULL5 1215 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 FKBP9O95302 570 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ENO3P13929 434 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 FMO5P49326 533 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CCDC15Q0P6D6 951 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 MKRN4PQ13434 485 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CDC42EP5Q6NZY7 148 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 FAM180AQ6UWF9 173 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 SYDE1Q6ZW31 735 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 PLEKHM3Q6ZWE6 761 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 FKBP9P1Q75LS8 142 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ETNK1Q9HBU6 452 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ZC3H7BQ9UGR2 993 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CHUKO15111 745 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 ZNF185O15231 689 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CHGBP05060 677 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 THPOP40225 353 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 E2F4Q16254 413 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 AMHR2Q16671 573 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 SHC4Q6S5L8 630 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 CLEC10AQ8IUN9 316 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 RBBP8NLQ8NC74 664 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 SPATA18Q8TC71 538 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 PPP1R2P1Q96PQ5 205 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 FOXN1O15353 648 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 MZF1P28698 734 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 STAT4Q14765 748 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 OOSP2Q86WS3 158 aa12.3□□□□□ -0.44
SHPRH-211ENST00000629427 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
SHPRH-211ENST00000629427 PHKG1Q16816 387 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 DEPDC1Q5TB30 811 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 FAM162AQ96A26 154 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 HPDLQ96IR7 371 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 GIMAP4Q9NUV9 329 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 TBC1D4O60343 1298 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 TRIM16O95361 564 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 ERFP50548 548 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 PMS1P54277 932 aaKnown RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 FCGRTP55899 365 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 CDH18Q13634 790 aa12.29□□□□□ -0.44
SHPRH-211ENST00000629427 PAN2Q504Q3 1202 aaKnown RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 GTF3C2Q8WUA4 911 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-211ENST00000629427 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms