RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 STON1Q9Y6Q2 735 aa13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 NPEPPSP55786 919 aa13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 CTTNQ14247 550 aaKnown RBP13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 TRIM16LQ309B1 348 aa13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 UGT3A1Q6NUS8 523 aa13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 SCFD2Q8WU76 684 aa13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 ENOPH1Q9UHY7 261 aa13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-208ENST00000629380 VCLP18206 1134 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 KCNA3P22001 575 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 GRIK1P39086 918 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 COASYQ13057 564 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ADCK2Q7Z695 626 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 KCNV2Q8TDN2 545 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 NSUN6Q8TEA1 469 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 CCT7Q99832 543 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 BHMT2Q9H2M3 363 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 PTPRMP28827 1452 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 PDZK1P1A8MUH7 402 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 STILQ15468 1287 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 NEK10Q6ZWH5 1172 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ARL8AQ96BM9 186 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ADORA1P30542 326 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 CUL4AQ13619 759 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 TMA16Q96EY4 203 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 PARK7Q99497 189 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 OLFM1Q99784 485 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 SMIM31A0A1B0GVY4 71 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 LRRC8DQ7L1W4 858 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 RAD54LQ92698 747 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 TRPC7Q9HCX4 862 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 PYCARDQ9ULZ3 195 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 MTO1Q9Y2Z2 717 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 KLHL24Q6TFL4 600 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 RFFLQ8WZ73 363 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 VIPAS39Q9H9C1 493 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 FAM47DPA6NHR8 397 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 NFIBO00712 420 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 KCNN4O15554 427 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 C11orf88Q6PI97 169 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ADAMTS1Q9UHI8 967 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ENO1P06733 434 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ADORA2BP29275 332 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 FAM45AQ8TCE6 357 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 MAP4K1Q92918 833 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ACTR2P61160 394 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 LCORLQ8N3X6 602 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 DDI1Q8WTU0 396 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 JPH1Q9HDC5 661 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
SYNGAP1-208ENST00000629380 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 KNOP1Q1ED39 458 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 RINLQ6ZS11 566 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SPATA2LQ8IUW3 424 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 IARS2Q9NSE4 1012 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 ADGRA3Q8IWK6 1321 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 FKBP9O95302 570 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 FAM45BPQ6NSW5 357 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SRLQ86TD4 932 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 AGTP01019 485 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SPATA33Q96N06 139 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 IL18RAPO95256 599 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 FCER1AP12319 257 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 NUP107P57740 925 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 GRAMD1CQ8IYS0 662 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SIKE1Q9BRV8 207 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 ARMC7Q9H6L4 198 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 FBXO2Q9UK22 296 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.29e-9■■■■■ 62.4
SYNGAP1-208ENST00000629380 USP17L10C9JJH3 530 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 KCNK10P57789 538 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 NDUFA5Q16718 116 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SLC30A9Q6PML9 568 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 LINC00301Q8NCQ3 95 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 SENP7Q9BQF6 1050 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 TBC1D12O60347 775 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 MMP19Q99542 508 aa13.78□□□□□ -0.2
SYNGAP1-208ENST00000629380 ZNF839A8K0R7 811 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms