RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
CHD2-218ENST00000629346 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
CHD2-218ENST00000629346 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
CHD2-218ENST00000629346 ZSWIM4Q9H7M6 989 aa13.12□□□□□ -0.31
CHD2-218ENST00000629346 ATG2BQ96BY7 2078 aa13.12□□□□□ -0.31
CHD2-218ENST00000629346 KIF26AQ9ULI4 1882 aaPredicted RBP13.11□□□□□ -0.31
CHD2-218ENST00000629346 A0A087WWV3 80 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 H7C4K7 107 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 N4BP3O15049 544 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 MARCH6O60337 910 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 EGFP01133 1207 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 CAPNS1P04632 268 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 RDXP35241 583 aaKnown RBP13.11□□□□□ -0.31
CHD2-218ENST00000629346 DGKEP52429 567 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 TMEM196Q5HYL7 178 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 PIGKQ92643 395 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
CHD2-218ENST00000629346 UROC1Q96N76 676 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
CHD2-218ENST00000629346 ADPGKQ9BRR6 497 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
CHD2-218ENST00000629346 PRMT7Q9NVM4 692 aaPredicted RBP13.11□□□□□ -0.31
CHD2-218ENST00000629346 CYSRT1A8MQ03 144 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 DGAT1O75907 488 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 APBB3O95704 486 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
CHD2-218ENST00000629346 CPB1P15086 417 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 DHPSP49366 369 aaPredicted RBP13.1□□□□□ -0.31
CHD2-218ENST00000629346 RCAN1P53805 252 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 PRPF4BQ13523 1007 aaKnown RBP13.1□□□□□ -0.31
CHD2-218ENST00000629346 INF2Q27J81 1249 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 EEF1DP3Q658K8 133 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 FBRSL1Q9HCM7 1045 aaKnown RBP13.1□□□□□ -0.31
CHD2-218ENST00000629346 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 AFF4Q9UHB7 1163 aaKnown RBP13.1□□□□□ -0.31
CHD2-218ENST00000629346 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 ARID2Q68CP9 1835 aa13.1□□□□□ -0.31
CHD2-218ENST00000629346 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 REC8O95072 547 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 PRAMEF12O95522 483 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.315e-18■■□□□ 13.8
CHD2-218ENST00000629346 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 SOX4Q06945 474 aaPredicted RBP13.09□□□□□ -0.31
CHD2-218ENST00000629346 PTPAQ15257 358 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 PMS2CLQ68D20 193 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 PPP4R3AQ6IN85 833 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 BLIDQ8IZY5 108 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 GLIS3Q8NEA6 775 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 RPLP0P6Q8NHW5 317 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 KCNB2Q92953 911 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 PGLYRP2Q96PD5 576 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 LRRC3Q9BY71 257 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
CHD2-218ENST00000629346 FZD8Q9H461 694 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 KCNMB3Q9NPA1 279 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 YIPF1Q9Y548 306 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
CHD2-218ENST00000629346 NUP205Q92621 2012 aa13.08□□□□□ -0.31
CHD2-218ENST00000629346 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
CHD2-218ENST00000629346 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 FAM221BA6H8Z2 402 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 H0Y626 953 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 PODXLO00592 558 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 SYN3O14994 580 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 USO1O60763 962 aaKnown RBP13.08□□□□□ -0.32
CHD2-218ENST00000629346 SLITRK3O94933 977 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 TRIM16O95361 564 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 PRB1P04280 392 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 CPA1P15085 419 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 BCKDHBP21953 392 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 HSPA4P34932 840 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 FAM193AP78312 1265 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 LMAN2Q12907 356 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 PSMD2Q13200 908 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
CHD2-218ENST00000629346 DMC1Q14565 340 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
CHD2-218ENST00000629346 TRIM68Q6AZZ1 485 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 ZNF280DQ6N043 979 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 ABCA7Q8IZY2 2146 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 PIGOQ8TEQ8 1089 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 HAS1Q92839 578 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
CHD2-218ENST00000629346 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
CHD2-218ENST00000629346 EBF3Q9H4W6 596 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms