RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 IRF2BPLQ9H1B7 796 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 DISC1Q9NRI5 854 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 RBM28Q9NW13 759 aaKnown RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 FANCLQ9NW38 375 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 BARHL2Q9NY43 387 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 WASF2Q9Y6W5 498 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 NFASCO94856 1347 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 A0A087WZ62 844 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 C2orf71A6NGG8 1288 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 GOLGA6L6A8MZA4 724 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ZBTB42B2RXF5 422 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 DYNC1I1O14576 645 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 HOXB8P17481 243 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ATF7P17544 494 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 KLRC2P26717 231 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SMC1AQ14683 1233 aaKnown RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PKN1Q16512 942 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 GLB1LQ6UWU2 654 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC73Q6ZRK6 1079 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CATSPER4Q7RTX7 472 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SGMS1Q86VZ5 419 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 RELL1Q8IUW5 271 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 C17orf53Q8N3J3 647 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 TMEM105Q8N8V8 129 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 MRPL43Q8N983 215 aaKnown RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 FSIP1Q8NA03 581 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 MYRIPQ8NFW9 859 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SUSD6Q92537 303 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 C8orf76Q96K31 380 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 FDXACB1Q9BRP7 624 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 APOL6Q9BWW8 343 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 SLC26A6Q9BXS9 759 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 BHLHE41Q9C0J9 482 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 METTL14Q9HCE5 456 aaKnown RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 C6orf50Q9HD87 102 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 NRBP2Q9NSY0 501 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 VPS54Q9P1Q0 977 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 ORC3Q9UBD5 711 aaPredicted RBP5.33□□□□□ -1.56
LINC00550-201ENST00000629293 CEP131Q9UPN4 1083 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 PPME1Q9Y570 386 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 KDM3AQ9Y4C1 1321 aa5.33□□□□□ -1.56
LINC00550-201ENST00000629293 METTL12A8MUP2 240 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 WDR64B1ANS9 1081 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 DHX15O43143 795 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 ZNF862O60290 1169 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 GPR32O75388 356 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 SASH3O75995 380 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 BMP6P22004 513 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 TARSP26639 723 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 CEBPZQ03701 1054 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 AP3B2Q13367 1082 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 UGCGQ16739 394 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 LRCH2Q5VUJ6 765 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 CCDC149Q6ZUS6 474 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 DHX40Q8IX18 779 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 RIN2Q8WYP3 895 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 NKD2Q969F2 451 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 FAM193BQ96PV7 902 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 S1PR5Q9H228 398 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 TBC1D22BQ9NU19 505 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 DNAJB4Q9UDY4 337 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 CLIC4Q9Y696 253 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 MAGEB2O15479 319 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 POMCP01189 267 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 SRGAP2CP0DJJ0 459 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 DNM2P50570 870 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 NLRP5P59047 1200 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 RPS26P62854 115 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 NTRK3Q16288 839 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 AXDND1Q5T1B0 1012 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 MIER3Q7Z3K6 550 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 RBBP8NLQ8NC74 664 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 RABGGTAQ92696 567 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 ACSF2Q96CM8 615 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 PCDHB5Q9Y5E4 795 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 STK36Q9NRP7 1315 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 IGLV3-22A0A075B6J6 115 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 A0A1B0GTH6 734 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 FAM237AA0A1B0GTK4 181 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 KINO60870 393 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 CLASP2O75122 1294 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 DARSP14868 501 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 MTHFRP42898 656 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 ME1P48163 572 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 GPC3P51654 580 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 KIAA1841Q6NSI8 718 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 ADSSL1Q8N142 457 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 SLC39A11Q8N1S5 342 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 SPC24Q8NBT2 197 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 RSAD2Q8WXG1 361 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 FAM167AQ96KS9 214 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 BPIFA3Q9BQP9 254 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 SRRTQ9BXP5 876 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 GCOM2Q9BZD3 368 aaPredicted RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 PIDD1Q9HB75 910 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 BRD7Q9NPI1 651 aa5.32□□□□□ -1.56
LINC00550-201ENST00000629293 DDX56Q9NY93 547 aaKnown RBP5.32□□□□□ -1.56
LINC00550-201ENST00000629293 MYH9P35579 1960 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms