RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 TAS1R1Q7RTX1 841 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 VPS52Q8N1B4 723 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 ANKRD20A12PQ8NF67 263 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 TAS1R2Q8TE23 839 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 POF1BQ8WVV4 589 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 LZTS1Q9Y250 596 aa20.27■□□□□ 0.84
MECP2-216ENST00000627864 TSC2P49815 1807 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 KPNA7A9QM74 516 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 PES1O00541 588 aaKnown RBP20.26■□□□□ 0.83
MECP2-216ENST00000627864 CSPG5O95196 566 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 PAX3P23760 479 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 DNAJB1P25685 340 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 ATICP31939 592 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 UBE3AQ05086 875 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 GRIN2CQ14957 1233 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 KRT31Q15323 416 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 CEP57Q86XR8 500 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 FBXL13Q8NEE6 735 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 ELMO3Q96BJ8 720 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 SUSD3Q96L08 255 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 B3GALT6Q96L58 329 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 SENP8Q96LD8 212 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 VPS16Q9H269 839 aa20.26■□□□□ 0.83
MECP2-216ENST00000627864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.26■□□□□ 0.83
MECP2-216ENST00000627864 LIMA1Q9UHB6 759 aaKnown RBP20.26■□□□□ 0.83
MECP2-216ENST00000627864 EFEMP2O95967 443 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 SOD2P04179 222 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 TPM2P07951 284 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 ATP1A3P13637 1013 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 AARSP49588 968 aaKnown RBP eCLIP20.25■□□□□ 0.83
MECP2-216ENST00000627864 SGSM1Q2NKQ1 1148 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 ZNF699Q32M78 642 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 USP41Q3LFD5 358 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 VWA3BQ502W6 1294 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 RNF214Q8ND24 703 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 SEMA4DQ92854 862 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 PI4K2AQ9BTU6 479 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 HERC2P3Q9BVR0 1158 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 NDST4Q9H3R1 872 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 RAB20Q9NX57 234 aa20.25■□□□□ 0.83
MECP2-216ENST00000627864 CYB561D2O14569 222 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 LRRN2O75325 713 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 TKTP29401 623 aaKnown RBP20.24■□□□□ 0.83
MECP2-216ENST00000627864 CA8P35219 290 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 COPB1P53618 953 aaKnown RBP20.24■□□□□ 0.83
MECP2-216ENST00000627864 ERVFC1P60507 584 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 CETN1Q12798 172 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 KIAA1841Q6NSI8 718 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 GPR153Q6NV75 609 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 TMC7Q7Z402 723 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 RNF168Q8IYW5 571 aaPredicted RBP20.24■□□□□ 0.83
MECP2-216ENST00000627864 CCDC150Q8NCX0 1101 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 MICAL1Q8TDZ2 1067 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 IMPG2Q9BZV3 1241 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 LMAN2LQ9H0V9 348 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 XYLT2Q9H1B5 865 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 TLR9Q9NR96 1032 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 STK39Q9UEW8 545 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 PCDHB8Q9UN66 801 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 COQ4Q9Y3A0 265 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 TIMM13Q9Y5L4 95 aaPredicted RBP20.24■□□□□ 0.83
MECP2-216ENST00000627864 SNX9Q9Y5X1 595 aa20.24■□□□□ 0.83
MECP2-216ENST00000627864 M0QZQ0 153 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 PMM2O15305 246 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 P4HA2O15460 535 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 LPXNO60711 386 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 STAU1O95793 577 aaKnown RBP20.23■□□□□ 0.83
MECP2-216ENST00000627864 FGFR3P22607 806 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 GLUD2P49448 558 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
MECP2-216ENST00000627864 CAMK1Q14012 370 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 WDR72Q3MJ13 1102 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 ZNF667Q5HYK9 610 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 SPOPLQ6IQ16 392 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.23■□□□□ 0.83
MECP2-216ENST00000627864 Q7L0L9 218 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 AUTS2Q8WXX7 1259 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 TAF4BQ92750 862 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 TCF25Q9BQ70 676 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 TTPALQ9BTX7 342 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 ZBP1Q9H171 429 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 ENTPD7Q9NQZ7 604 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 GDAP2Q9NXN4 497 aa20.23■□□□□ 0.83
MECP2-216ENST00000627864 NXF1Q9UBU9 619 aaKnown RBP20.23■□□□□ 0.83
MECP2-216ENST00000627864 LAMA2P24043 3122 aaKnown RBP20.22■□□□□ 0.83
MECP2-216ENST00000627864 C2CD2LO14523 706 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 SYN3O14994 580 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 HUS1O60921 280 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 CXCL14O95715 111 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 ASS1P00966 412 aaKnown RBP20.22■□□□□ 0.83
MECP2-216ENST00000627864 URODP06132 367 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 CTSAP10619 480 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 ODC1P11926 461 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 TNNC1P63316 161 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
MECP2-216ENST00000627864 WDR44Q5JSH3 913 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 RTP2Q5QGT7 225 aa20.22■□□□□ 0.83
MECP2-216ENST00000627864 EHBP1Q8NDI1 1231 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms