RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 HMGB4Q8WW32 186 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 RNF166Q96A37 237 aaPredicted RBP3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 ZBTB10Q96DT7 871 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 TBC1D32Q96NH3 1257 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 SLC46A1Q96NT5 459 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 RMDN3Q96TC7 470 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 CORO1BQ9BR76 489 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 TMEM175Q9BSA9 504 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 TRPV4Q9HBA0 871 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 RTN4Q9NQC3 1192 aaKnown RBP3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 DACT1Q9NYF0 836 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 DNAJB4Q9UDY4 337 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 TPCN1Q9ULQ1 816 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 PRG3Q9Y2Y8 225 aaPredicted RBP3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 LAMA1P25391 3075 aa3.47□□□□□ -1.85
SCARNA15.3-201ENST00000626315 BAZ2BQ9UIF8 2168 aaKnown RBP3.46□□□□□ -1.85
SCARNA15.3-201ENST00000626315 NFASCO94856 1347 aa3.46□□□□□ -1.85
SCARNA15.3-201ENST00000626315 WDR19Q8NEZ3 1342 aa3.46□□□□□ -1.85
SCARNA15.3-201ENST00000626315 A0A0U1RQF3 1178 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 E2F8A0AVK6 867 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PRR19A6NJB7 356 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 FAM171A2A8MVW0 826 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NRP1O14786 923 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 BCAT2O15382 392 aaPredicted RBP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CYP26A1O43174 497 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 JAK2O60674 1132 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ZNF217O75362 1048 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ALDH1L1O75891 902 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CIAO1O76071 339 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 REC8O95072 547 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ALX3O95076 343 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 WNT1P04628 370 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NR3C2P08235 984 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MARK3P27448 753 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ELF1P32519 619 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 IL15P40933 162 aaPredicted RBP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 OR1G1P47890 313 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 USP11P51784 963 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 LSM11P83369 360 aaKnown RBP eCLIP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 INSM1Q01101 510 aaPredicted RBP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TNK2Q07912 1038 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NEDD9Q14511 834 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DSC3Q14574 896 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SART3Q15020 963 aaKnown RBP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TEAD4Q15561 434 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 VWA2Q5GFL6 755 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 C3orf38Q5JPI3 329 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DMRTA1Q5VZB9 504 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 HGSNATQ68CP4 663 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 IQCEQ6IPM2 695 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 FOXR1Q6PIV2 292 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 IGF2-ASQ6U949 168 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KANSL1Q7Z3B3 1105 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 C14orf80Q86SX3 495 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SLC41A1Q8IVJ1 513 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CCDC33Q8N5R6 958 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PPM1NQ8N819 430 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 C8orf58Q8NAV2 365 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 RFFLQ8WZ73 363 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ZNF419Q96HQ0 510 aaPredicted RBP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ZSWIM3Q96MP5 696 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 TAAR1Q96RJ0 339 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 FUCA2Q9BTY2 467 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SNTG2Q9NY99 539 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ERAP1Q9NZ08 941 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MAP10Q9P2G4 905 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KANSL3Q9P2N6 904 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PPM1HQ9ULR3 514 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 RPH3AQ9Y2J0 694 aaPredicted RBP3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PCDHB11Q9Y5F2 797 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PCDHA2Q9Y5H9 948 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 COL1A2P08123 1366 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ABCA4P78363 2273 aa3.46□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MYO16Q9Y6X6 1858 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CACNA1FO60840 1977 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 LRRK1Q38SD2 2015 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 A0A1B0GVT2 93 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SMIM35A0A1B0GVV1 85 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 C3orf80F5H4A9 247 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DHX15O43143 795 aaKnown RBP3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 DFNA5O60443 496 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 PLA2G6O60733 806 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ITGAVP06756 1048 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 KRT19P08727 400 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 THEGLP0DJG4 465 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CYP2D6P10635 497 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 CKMT2P17540 419 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 EIF2AK2P19525 551 aaKnown RBP3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 NR1D1P20393 614 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 ABCB4P21439 1286 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 UBA1P22314 1058 aaKnown RBP3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SREBF1P36956 1147 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SEC13P55735 322 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 SP4Q02446 784 aa3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 FOXD4Q12950 439 aaPredicted RBP3.45□□□□□ -1.86
SCARNA15.3-201ENST00000626315 MRPL49Q13405 166 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms