RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 NR1I3Q14994 352 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PTPN21Q16825 1174 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 EPC2Q52LR7 807 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 GBP6Q6ZN66 633 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 LRRC52Q8N7C0 313 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 COLGALT1Q8NBJ5 622 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 CCDC150Q8NCX0 1101 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 C3orf58Q8NDZ4 430 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 SEMA4DQ92854 862 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 HPDLQ96IR7 371 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PI4K2AQ9BTU6 479 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 COLEC11Q9BWP8 271 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 IMPG2Q9BZV3 1241 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 TRIM5Q9C035 493 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 XPO4Q9C0E2 1151 aaKnown RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 INTS2Q9H0H0 1204 aaKnown RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PRO3102Q9H379 93 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 AAASQ9NRG9 546 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 RAB20Q9NX57 234 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 FAN1Q9Y2M0 1017 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 NUB1Q9Y5A7 615 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 PCDHA11Q9Y5I1 949 aa9.16□□□□□ -0.94
SGMS1-211ENST00000626236 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
SGMS1-211ENST00000626236 GTPBP10A4D1E9 387 aaKnown RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 TADA2AO75478 443 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 ITGB1P05556 798 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 TPM3P06753 285 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 SLC9A1P19634 815 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 IGFBP6P24592 240 aaPredicted RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 ATICP31939 592 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 CTNNB1P35222 781 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 KLK7P49862 253 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 LILRA4P59901 499 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 TNNC1P63316 161 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 NOP14P78316 857 aaKnown RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 LRMPQ12912 555 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 SYCP1Q15431 976 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 RAB30Q15771 203 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 EXOC3L4Q17RC7 722 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 SGSM1Q2NKQ1 1148 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 WDR72Q3MJ13 1102 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 SV2CQ496J9 727 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 SPOPLQ6IQ16 392 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 TRIM65Q6PJ69 517 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 DCLRE1AQ6PJP8 1040 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 SARM1Q6SZW1 724 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 KCNT2Q6UVM3 1135 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 TMEM173Q86WV6 379 aaPredicted RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 TAF4BQ92750 862 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 LSM14BQ9BX40 385 aaKnown RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 PBX4Q9BYU1 374 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 NKX2-4Q9H2Z4 354 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 GRPEL1Q9HAV7 217 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 MARCH5Q9NX47 278 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 MSRAQ9UJ68 235 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 ADAM28Q9UKQ2 775 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 YBX2Q9Y2T7 364 aaKnown RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 COQ4Q9Y3A0 265 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 PCDHB12Q9Y5F1 795 aa9.15□□□□□ -0.94
SGMS1-211ENST00000626236 COL4A4P53420 1690 aaPredicted RBP9.15□□□□□ -0.94
SGMS1-211ENST00000626236 VWA8A3KMH1 1905 aa9.15□□□□□ -0.95
SGMS1-211ENST00000626236 FSD2A1L4K1 749 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 KPNA7A9QM74 516 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 TMEM189-UBE2V1I3L0A0 370 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 I3L4J1 428 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 SPTLC1O15269 473 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 STAU1O95793 577 aaKnown RBP9.14□□□□□ -0.95
SGMS1-211ENST00000626236 ASS1P00966 412 aaKnown RBP9.14□□□□□ -0.95
SGMS1-211ENST00000626236 LINC00271P0C7V0 271 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 PON1P27169 355 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 PPM1AP35813 382 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 BRCC3P46736 316 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 APBA1Q02410 837 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 KCNMA1Q12791 1236 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 ZNF667Q5HYK9 610 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 PPP2R2DQ66LE6 453 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 CD300LGQ6UXG3 332 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 DSTYKQ6XUX3 929 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 SCARA5Q6ZMJ2 495 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 LMO3Q8TAP4 145 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 BCL7CQ8WUZ0 217 aaPredicted RBP9.14□□□□□ -0.95
SGMS1-211ENST00000626236 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.957e-7■■■■□ 21.6
SGMS1-211ENST00000626236 TMEM169Q96HH4 297 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 IGSF21Q96ID5 467 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 NT5C1BQ96P26 610 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 ERGIC2Q96RQ1 377 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 MMS19Q96T76 1030 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 C17orf80Q9BSJ5 609 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 XYLT2Q9H1B5 865 aa9.14□□□□□ -0.95
SGMS1-211ENST00000626236 APOBEC3GQ9HC16 384 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms