RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CBWD2Q8IUF1 395 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 EFCAB13Q8IY85 973 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 CGRRF1Q99675 332 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 MKNK1Q9BUB5 465 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 PDE11AQ9HCR9 933 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 INTS13Q9NVM9 706 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 DMAC2Q9NW81 257 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 ZDHHC7Q9NXF8 308 aa15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 BARX2Q9UMQ3 279 aaPredicted RBP15.12■□□□□ 0.01
SNRPA1-216ENST00000626000 OR6C75A6NL08 312 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 MBTPS2O43462 519 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 GADD45BO75293 160 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 OAZ2O95190 189 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 BMP1P13497 986 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 TNNI1P19237 187 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 HOXA9P31269 272 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 BRCC3P46736 316 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 TPGS2Q68CL5 300 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 LLGL2Q6P1M3 1020 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 CD300LGQ6UXG3 332 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 CCDC149Q6ZUS6 474 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 INTS8Q75QN2 995 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 VN1R2Q8NFZ6 395 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 TMC2Q8TDI7 906 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 ADAM7Q9H2U9 754 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 TSHZ2Q9NRE2 1034 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 VWA8A3KMH1 1905 aa15.11■□□□□ 0.01
SNRPA1-216ENST00000626000 REV3LO60673 3130 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 MTCL1Q9Y4B5 1905 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 KPNA7A9QM74 516 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 IKBKBO14920 756 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 CETN3O15182 167 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 ITGB3P05106 788 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 CYP11A1P05108 521 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 POU2F2P09086 479 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 HNRNPA1P09651 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 DLATP10515 647 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 KRT13P13646 458 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 EPCAMP16422 314 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 NR2F2P24468 414 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 KCNQ1P51787 676 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 DLX2Q07687 328 aaPredicted RBP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 SMARCB1Q12824 385 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 MRPL58Q14197 206 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 CTXN3Q4LDR2 81 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 ATAT1Q5SQI0 421 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 PRSS55Q6UWB4 352 aaPredicted RBP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 DPH6Q7L8W6 267 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 THEM5Q8N1Q8 247 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 TMEM86AQ8N2M4 240 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 CSGALNACT2Q8N6G5 542 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 ADAMTS19Q8TE59 1207 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 DHTKD1Q96HY7 919 aaPredicted RBP15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 B3GALT6Q96L58 329 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 MTMR12Q9C0I1 747 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 MAN1C1Q9NR34 630 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 FBXW11Q9UKB1 542 aa15.1■□□□□ 0.01
SNRPA1-216ENST00000626000 BICDL2A1A5D9 508 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 I3L4J1 428 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 TGM5O43548 720 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 STX10O60499 249 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 HUS1O60921 280 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 PAPLNO95428 1278 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 KRT19P08727 400 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 POLR2BP30876 1174 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 ATICP31939 592 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 ELF1P32519 619 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CLDN10P78369 228 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 FKBP3Q00688 224 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 ADAM9Q13443 819 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CBX2Q14781 532 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 ZCWPW2Q504Y3 356 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CEP135Q66GS9 1140 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CENPPQ6IPU0 288 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 LILRA6Q6PI73 481 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 SYCE2Q6PIF2 218 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 C1orf127Q8N9H9 656 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 RDH13Q8NBN7 331 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 KREMEN2Q8NCW0 462 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 ZNF461Q8TAF7 563 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 SUSD6Q92537 303 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CLSTN3Q9BQT9 956 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 GDAP2Q9NXN4 497 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 USP15Q9Y4E8 981 aaPredicted RBP15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 CDY1Q9Y6F8 540 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 UNC80Q8N2C7 3258 aa15.09■□□□□ 0.01
SNRPA1-216ENST00000626000 XYLBO75191 536 aa15.08■□□□□ 0
SNRPA1-216ENST00000626000 STAU1O95793 577 aaKnown RBP15.08■□□□□ 0
SNRPA1-216ENST00000626000 FAM163BP0C2L3 166 aa15.08■□□□□ 0
SNRPA1-216ENST00000626000 EPB41P11171 864 aaKnown RBP15.08■□□□□ 0
SNRPA1-216ENST00000626000 OR1D2P34982 312 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms