RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 IL1RL1Q01638 556 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 EHHADHQ08426 723 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 CAMK2GQ13555 558 aaPredicted RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 CAPRIN1Q14444 709 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 LMNTD2Q8IXW0 634 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 TFB1MQ8WVM0 346 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 PSMB7Q99436 277 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 PYGBP11216 843 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 KLRC1P26715 233 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 POLR2LP62875 67 aaKnown RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 CYB5D1Q6P9G0 228 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 RHOT1Q8IXI2 618 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 ZNF655Q8N720 491 aaPredicted RBP11.66□□□□□ -0.54
VPS8-227ENST00000625842 FAM133AQ8N9E0 248 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 TADA1Q96BN2 335 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 HPDLQ96IR7 371 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 CLIC6Q96NY7 704 aa11.66□□□□□ -0.54
VPS8-227ENST00000625842 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS8-227ENST00000625842 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 POTEMA6NI47 508 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 PODXLO00592 558 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 SLC16A3O15427 465 aaKnown RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 ARIH2O95376 493 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 HTR1BP28222 390 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 NR5A1Q13285 461 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 TXNRD3Q86VQ6 643 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 RSPH1Q8WYR4 309 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 PANX2Q96RD6 677 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 RSAD1Q9HA92 442 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 GSG1L2A8MUP6 293 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 EEF2KO00418 725 aaKnown RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 OGTO15294 1046 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 KELP23276 732 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 HMOX2P30519 316 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 CHRNA3P32297 505 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 ROR1Q01973 937 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 NFIAQ12857 509 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 HP1BP3Q5SSJ5 553 aaPredicted RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 TRMT11Q7Z4G4 463 aaKnown RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 METTL3Q86U44 580 aaKnown RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 ZNF248Q8NDW4 579 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 VPS28Q9UK41 221 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 C2orf81A6NN90 581 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 E9PMD0 336 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 HGSO14964 777 aaPredicted RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 PDGFRBP09619 1106 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 CYP2A6P11509 494 aaPredicted RBP11.65□□□□□ -0.54
VPS8-227ENST00000625842 HPGDP15428 266 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 KLHL35Q6PF15 583 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 KRT78Q8N1N4 520 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 GMCL1Q96IK5 515 aa11.65□□□□□ -0.54
VPS8-227ENST00000625842 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 INPP5BP32019 993 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 NAMPTP43490 491 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.55
VPS8-227ENST00000625842 COASYQ13057 564 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 TIGD7Q6NT04 549 aaPredicted RBP11.65□□□□□ -0.55
VPS8-227ENST00000625842 FBXO16Q8IX29 292 aaPredicted RBP11.65□□□□□ -0.55
VPS8-227ENST00000625842 GUF1Q8N442 669 aaKnown RBP11.65□□□□□ -0.55
VPS8-227ENST00000625842 ATP8B4Q8TF62 1192 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 WNK4Q96J92 1243 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 CABS1Q96KC9 395 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 OMDQ99983 421 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 NIF3L1Q9GZT8 377 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 BRD9Q9H8M2 597 aa11.65□□□□□ -0.55
VPS8-227ENST00000625842 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 EXTL3O43909 919 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 RHOCP08134 193 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 SLC1A1P43005 524 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 RAP1GDS1P52306 607 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 PDCD2Q16342 344 aaPredicted RBP11.64□□□□□ -0.55
VPS8-227ENST00000625842 KLHL38Q2WGJ6 581 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 OVOS1Q6IE37 1185 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 AFAP1L1Q8TED9 768 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 CCDC138Q96M89 665 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 ZDHHC4Q9NPG8 344 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
VPS8-227ENST00000625842 CYB561D2O14569 222 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 ANXA9O76027 345 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 CDH6P55285 790 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 NCALDP61601 193 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
VPS8-227ENST00000625842 GRIK4Q16099 956 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 KIF19Q2TAC6 998 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 GMCL1P1Q8NEA9 526 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 PNMA5Q96PV4 448 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 DPH5Q9H2P9 285 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 DPP3Q9NY33 737 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 CEP72Q9P209 647 aa11.64□□□□□ -0.55
VPS8-227ENST00000625842 TPX2Q9ULW0 747 aaKnown RBP11.64□□□□□ -0.55
VPS8-227ENST00000625842 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.551e-6■■■■■ 144
VPS8-227ENST00000625842 AP1G2O75843 785 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms