RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-217ENST00000624009 ZXDAP98168 799 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 ROR1Q01973 937 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 YWHAHQ04917 246 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-217ENST00000624009 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 MTMR3Q13615 1198 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 MYBPC2Q14324 1141 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 PPM1LQ5SGD2 360 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 C9orf57Q5W0N0 161 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 ARMCX5Q6P1M9 558 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 RSPO2Q6UXX9 243 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-217ENST00000624009 C12orf56Q8IXR9 622 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 GPD1LQ8N335 351 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 GOLGA5Q8TBA6 731 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 FGFBP2Q9BYJ0 223 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 IGSF9Q9P2J2 1179 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 HSFX1Q9UBD0 423 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
LINC00963-217ENST00000624009 CDH22Q9UJ99 828 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
LINC00963-217ENST00000624009 I3L4J1 428 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 WEE2P0C1S8 567 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 SPATA31D3P0C874 917 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 ODC1P11926 461 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 TAF6P49848 677 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 SPAG1Q07617 926 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 KANK3Q6NY19 840 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 TRIM67Q6ZTA4 783 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 SPATA31D4Q6ZUB0 917 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 HS2ST1Q7LGA3 356 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 USP37Q86T82 979 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 GLYCTKQ8IVS8 523 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 SLC7A14Q8TBB6 771 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 SCFD1Q8WVM8 642 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 PAGE5Q96GU1 130 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 CCDC34Q96HJ3 373 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 CBWD1Q9BRT8 395 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 FAM213AQ9BRX8 229 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 PIDD1Q9HB75 910 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
LINC00963-217ENST00000624009 RBAKQ9NYW8 714 aaPredicted RBP13.46□□□□□ -0.25
LINC00963-217ENST00000624009 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 ZNF233A6NK53 670 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 MICAL2O94851 1124 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 ELF1P32519 619 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 HOXD13P35453 343 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 SYKP43405 635 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 GPR17Q13304 367 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 CUL4BQ13620 913 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 DSTYKQ6XUX3 929 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 EFCAB13Q8IY85 973 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 LRRC52Q8N7C0 313 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 KCNH6Q9H252 994 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 AGPAT3Q9NRZ7 376 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 SERTAD1Q9UHV2 236 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 ITGA11Q9UKX5 1188 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 DENND4CQ5VZ89 1909 aa13.45□□□□□ -0.26
LINC00963-217ENST00000624009 A0A1B0GVL5 298 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 TGFB1I1O43294 461 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 KLRC4O43908 158 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 PRPF40AO75400 957 aaKnown RBP13.44□□□□□ -0.26
LINC00963-217ENST00000624009 KIF20AO95235 890 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 AFMP43652 599 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 KNOP1Q1ED39 458 aaKnown RBP13.44□□□□□ -0.26
LINC00963-217ENST00000624009 SV2CQ496J9 727 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 OVOS1Q6IE37 1185 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 LEMD2Q8NC56 503 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 GLIS3Q8NEA6 775 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 SAAL1Q96ER3 474 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 MFSD14AQ96MC6 490 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 IKZF4Q9H2S9 585 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 HSPBP1Q9NZL4 362 aa13.44□□□□□ -0.26
LINC00963-217ENST00000624009 KPNA7A9QM74 516 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 PRRG1O14668 218 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 PPEF2O14830 753 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 N4BP1O75113 896 aaKnown RBP13.43□□□□□ -0.26
LINC00963-217ENST00000624009 LRG1P02750 347 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 LAMP2P13473 410 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 FSHRP23945 695 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 GUCY2FP51841 1108 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 NDUFA8P51970 172 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 PLD1Q13393 1074 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 SNRNP35Q16560 246 aaKnown RBP13.43□□□□□ -0.26
LINC00963-217ENST00000624009 RIF1Q5UIP0 2472 aaKnown RBP13.43□□□□□ -0.26
LINC00963-217ENST00000624009 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 SLC9A9Q8IVB4 645 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 C1orf127Q8N9H9 656 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 XXYLT1Q8NBI6 393 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 CXorf38Q8TB03 319 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 C2orf15Q8WU43 125 aaKnown RBP13.43□□□□□ -0.26
LINC00963-217ENST00000624009 CCDC47Q96A33 483 aaKnown RBP13.43□□□□□ -0.26
LINC00963-217ENST00000624009 BORCS6Q96GS4 357 aa13.43□□□□□ -0.26
LINC00963-217ENST00000624009 BLZF1Q9H2G9 400 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms