RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 ZBTB33Q86T24 672 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 CCDC50Q8IVM0 306 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 EXOC8Q8IYI6 725 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 KATNAL2Q8IYT4 538 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 UBR7Q8N806 425 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 FEZF2Q8TBJ5 459 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZNF606Q8WXB4 792 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 ATG4AQ8WYN0 398 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 SNF8Q96H20 258 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 MPHOSPH6Q99547 160 aaKnown RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 HERPUD2Q9BSE4 406 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 PARVAQ9NVD7 372 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 ASIC3Q9UHC3 531 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 GGA2Q9UJY4 613 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TTLL13PA6NNM8 815 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 TLR3O15455 904 aaKnown RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 GAS2O43903 313 aaKnown RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 KIAA0754O94854 1291 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 AGTP01019 485 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 CST3P01034 146 aaPredicted RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 SRGAP2CP0DJJ0 459 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 RALAP11233 206 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 TAS2R40P59535 323 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 LAMTOR4Q0VGL1 99 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 KLF1Q13351 362 aaPredicted RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 MXD4Q14582 209 aaPredicted RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 SURF1Q15526 300 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 DAB2IPQ5VWQ8 1189 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 KCNV1Q6PIU1 500 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 CCDC25Q86WR0 208 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZBTB8OSQ8IWT0 167 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 ATL2Q8NHH9 583 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 EXD1Q8NHP7 514 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 RAPGEF5Q92565 580 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 CENPTQ96BT3 561 aa8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 ACO2Q99798 780 aaKnown RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 STMN4Q9H169 189 aaPredicted RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
SND1-IT1-201ENST00000623342 A0A0G2JLL6 359 aaPredicted RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 SMIM23A6NLE4 172 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 OGTO15294 1046 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 TP73O15350 636 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 LGR5O75473 907 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 PRKCBP05771 671 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MMP8P22894 467 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MARK3P27448 753 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CAV1Q03135 178 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 PPARDQ03181 441 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MCL1Q07820 350 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MAPK6Q16659 721 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 DUOXA2Q1HG44 320 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 UBAP2Q5T6F2 1119 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 RHBDF2Q6PJF5 856 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 PRRT2Q7Z6L0 340 aaPredicted RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 TADA2BQ86TJ2 420 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CCDC114Q96M63 670 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 GPR20Q99678 358 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 HEMGNQ9BXL5 484 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 OSBPL8Q9BZF1 889 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MTMR12Q9C0I1 747 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 C2orf40Q9H1Z8 148 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 USTQ9Y2C2 406 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 LRRC37A2A6NM11 1700 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 DICER1Q9UPY3 1922 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 O00370 1275 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 NOP56O00567 594 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 RASGRF2O14827 1237 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 IRF6O14896 467 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MEFVO15553 781 aaPredicted RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CNMDO75829 334 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 ARIH2O95376 493 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 LSM8O95777 96 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 SLC25A27O95847 323 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CALB1P05937 261 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 ATF2P15336 505 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 YBX3P16989 372 aaKnown RBP eCLIP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 IVDP26440 423 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CETN2P41208 172 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 SSR1P43307 286 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MMP13P45452 471 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 MYL6P60660 151 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CCNG2Q16589 344 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 SGSM1Q2NKQ1 1148 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 ZNF568Q3ZCX4 644 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 SCARA3Q6AZY7 606 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 PLPPR4Q7Z2D5 763 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 YTHDF3Q7Z739 585 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 CCDC125Q86Z20 511 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 RNF149Q8NC42 400 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 UHMK1Q8TAS1 419 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 EPS8L3Q8TE67 593 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 DCPSQ96C86 337 aaKnown RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 FAM212AQ96EL1 285 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 SCLT1Q96NL6 688 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 TRAIPQ9BWF2 469 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 ROPN1BQ9BZX4 212 aaPredicted RBP8.83□□□□□ -1
SND1-IT1-201ENST00000623342 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
SND1-IT1-201ENST00000623342 ASCC2Q9H1I8 757 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms