RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TBX10O75333 385 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 ZWINTO95229 277 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 PSMG1O95456 288 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 CYP3A4P08684 503 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 BMP3P12645 472 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 LAMB3Q13751 1172 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 FASTKD3Q14CZ7 662 aaKnown RBP14.94□□□□□ -0.02
LDB3-209ENST00000623056 CCNG2Q16589 344 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 HP1BP3Q5SSJ5 553 aaPredicted RBP14.94□□□□□ -0.02
LDB3-209ENST00000623056 DAB2IPQ5VWQ8 1189 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 CAPN12Q6ZSI9 719 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 CEP128Q6ZU80 1094 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 FBXO11Q86XK2 927 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 DAW1Q8N136 415 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 RFWD2Q8NHY2 731 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 GORASP1Q9BQQ3 440 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 WDR18Q9BV38 432 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 MAK16Q9BXY0 300 aaKnown RBP14.94□□□□□ -0.02
LDB3-209ENST00000623056 ADAM33Q9BZ11 813 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 FOXP3Q9BZS1 431 aa14.94□□□□□ -0.02
LDB3-209ENST00000623056 PIK3CDO00329 1044 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 GRIN3BO60391 1043 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 PSMD10O75832 226 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 HAUS5O94927 633 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 TJP3O95049 919 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 TROVE2P10155 538 aaKnown RBP eCLIP14.93□□□□□ -0.02
LDB3-209ENST00000623056 EEF2P13639 858 aaKnown RBP14.93□□□□□ -0.02
LDB3-209ENST00000623056 AP1B1Q10567 949 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 GSTA5Q7RTV2 222 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 ANKS1BQ7Z6G8 1248 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 LARGE2Q8N3Y3 721 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 DDX1Q92499 740 aaKnown RBP14.93□□□□□ -0.02
LDB3-209ENST00000623056 SEMA4DQ92854 862 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 GATA6Q92908 595 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 MRRFQ96E11 262 aaKnown RBP14.93□□□□□ -0.02
LDB3-209ENST00000623056 NACC1Q96RE7 527 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 TIPINQ9BVW5 301 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 ZCWPW1Q9H0M4 648 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 ANKFY1Q9P2R3 1169 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 A0A1B0GVG6 124 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 CFAP69A5D8W1 941 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 MAGEA13PA6NCF6 341 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 C6orf229H3BNL8 230 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 FDX1P10109 184 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 OVGP1Q12889 678 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 ZRSR2Q15696 482 aaKnown RBP14.93□□□□□ -0.02
LDB3-209ENST00000623056 CLEC16AQ2KHT3 1053 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 SHROOM1Q2M3G4 852 aaPredicted RBP14.93□□□□□ -0.02
LDB3-209ENST00000623056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.93□□□□□ -0.02
LDB3-209ENST00000623056 PHLDB2Q86SQ0 1253 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 DTX3LQ8TDB6 740 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 BICD1Q96G01 975 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 TTC25Q96NG3 672 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 VPS37BQ9H9H4 285 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 PCMTD2Q9NV79 361 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 KCND2Q9NZV8 630 aa14.93□□□□□ -0.02
LDB3-209ENST00000623056 GYG2O15488 501 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 SLC1A1P43005 524 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 PRELPP51888 382 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 PPP2R5CQ13362 524 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 CUL3Q13618 768 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 DRAXINQ8NBI3 349 aaPredicted RBP14.92□□□□□ -0.02
LDB3-209ENST00000623056 WDR60Q8WVS4 1066 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 HSPBP1Q9NZL4 362 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 STX18Q9P2W9 335 aaKnown RBP14.92□□□□□ -0.02
LDB3-209ENST00000623056 HEY2Q9UBP5 337 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 WDR91A4D1P6 747 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 PLSCR1O15162 318 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 CALCAP01258 141 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 GYS1P13807 737 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 ADRA1DP25100 572 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 CCNJLQ8IV13 435 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 KBTBD2Q8IY47 623 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 GLIS1Q8NBF1 620 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 XXYLT1Q8NBI6 393 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 PPFIBP2Q8ND30 876 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 DHX38Q92620 1227 aaKnown RBP14.92□□□□□ -0.02
LDB3-209ENST00000623056 STMN2Q93045 179 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 NSL1Q96IY1 281 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 EPAS1Q99814 870 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 OSBPL8Q9BZF1 889 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 GGA1Q9UJY5 639 aa14.92□□□□□ -0.02
LDB3-209ENST00000623056 A0A0G2JND7 137 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 DNALI1O14645 258 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 MAP3K7O43318 606 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 KRT4P19013 534 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 ATP2B4P23634 1241 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 LLGL2Q6P1M3 1020 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 RINLQ6ZS11 566 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 HELQQ8TDG4 1101 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 MCUR1Q96AQ8 359 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 TUBB6Q9BUF5 446 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 FHDC1Q9C0D6 1143 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 KRT82Q9NSB4 513 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 PSMC3IPQ9P2W1 217 aaPredicted RBP14.91□□□□□ -0.02
LDB3-209ENST00000623056 ARHGEF35A5YM69 484 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 IRF6O14896 467 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 PMM2O15305 246 aa14.91□□□□□ -0.02
LDB3-209ENST00000623056 GAS7O60861 476 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms