RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MYO1FO00160 1098 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 KRIT1O00522 736 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 DDX3YO15523 660 aaKnown RBP17.43■□□□□ 0.38
LDB3-208ENST00000623007 SPOPO43791 374 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 TBC1D8O95759 1140 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 CYP2B6P20813 491 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 POLR2BP30876 1174 aaKnown RBP17.43■□□□□ 0.38
LDB3-208ENST00000623007 CDH5P33151 784 aaPredicted RBP17.43■□□□□ 0.38
LDB3-208ENST00000623007 MAN1A1P33908 653 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 CTNNA1P35221 906 aaKnown RBP17.43■□□□□ 0.38
LDB3-208ENST00000623007 EPHB4P54760 987 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 NOMO3P69849 1222 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 ADAM17P78536 824 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 MYO1EQ12965 1108 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 MON1BQ7L1V2 547 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 CATSPER4Q7RTX7 472 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 SMC1BQ8NDV3 1235 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 ZNF606Q8WXB4 792 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 MS4A14Q96JA4 679 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 LRRC1Q9BTT6 524 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 MIS12Q9H081 205 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 LHX5Q9H2C1 402 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 PARVAQ9NVD7 372 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.43■□□□□ 0.38
LDB3-208ENST00000623007 ADAM22Q9P0K1 906 aa17.43■□□□□ 0.38
LDB3-208ENST00000623007 LACTBL1A8MY62 500 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 FAM155AB1AL88 458 aaPredicted RBP17.42■□□□□ 0.38
LDB3-208ENST00000623007 GPR32O75388 356 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 DARSP14868 501 aaKnown RBP17.42■□□□□ 0.38
LDB3-208ENST00000623007 NKX3-2P78367 333 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 LACTBP83111 547 aaPredicted RBP17.42■□□□□ 0.38
LDB3-208ENST00000623007 PAK2Q13177 524 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 CUL1Q13616 776 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 MESDQ14696 234 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 STILQ15468 1287 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
LDB3-208ENST00000623007 KAT2BQ92831 832 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 MTUS1Q9ULD2 1270 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 PCDHA3Q9Y5H8 950 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 RALGAPA2Q2PPJ7 1873 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 C17orf102A2RUQ5 167 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 KRT19P08727 400 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 ATF7P17544 494 aaPredicted RBP17.42■□□□□ 0.38
LDB3-208ENST00000623007 GBP1P32455 592 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 ASPAP45381 313 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 RWDD2BP57060 319 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 PTP4A2Q12974 167 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 CRHR2Q13324 411 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 SLC10A6Q3KNW5 377 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 NAA35Q5VZE5 725 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 RSPH3Q86UC2 560 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 RNPC3Q96LT9 517 aaKnown RBP17.42■□□□□ 0.38
LDB3-208ENST00000623007 FLRT1Q9NZU1 646 aa17.42■□□□□ 0.38
LDB3-208ENST00000623007 COMTP21964 271 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 HOXC8P31273 242 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 CYP2C19P33261 490 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 CETN2P41208 172 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 DNA2P51530 1060 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 CRYBB1P53674 252 aaPredicted RBP17.41■□□□□ 0.38
LDB3-208ENST00000623007 OSTNP61366 133 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 JADE1Q6IE81 842 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 PLEKHA7Q6IQ23 1121 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 C7orf31Q8N865 590 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 C1orf127Q8N9H9 656 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 CD101Q93033 1021 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 RAB17Q9H0T7 212 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 ACP6Q9NPH0 428 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 GDF3Q9NR23 364 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 WDR35Q9P2L0 1181 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 ANAPC7Q9UJX3 599 aa17.41■□□□□ 0.38
LDB3-208ENST00000623007 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
LDB3-208ENST00000623007 MGAMO43451 1857 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 TMEM88BA6NKF7 163 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 M0QZ92 97 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 ADCY6O43306 1168 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 MYL3P08590 195 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 NFICP08651 508 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 MMP8P22894 467 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 GJA9P57773 515 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 DHX34Q14147 1143 aaKnown RBP17.4■□□□□ 0.38
LDB3-208ENST00000623007 WDR72Q3MJ13 1102 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 DNAAF5Q86Y56 855 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 CEP120Q8N960 986 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 BEST2Q8NFU1 509 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 WHAMMQ8TF30 809 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 KRT12Q99456 494 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 MTG1Q9BT17 334 aaPredicted RBP17.4■□□□□ 0.38
LDB3-208ENST00000623007 TRIM6Q9C030 488 aaPredicted RBP17.4■□□□□ 0.38
LDB3-208ENST00000623007 MED4Q9NPJ6 270 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 IP6K2Q9UHH9 426 aa17.4■□□□□ 0.38
LDB3-208ENST00000623007 PSTPIP1O43586 416 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 SEC31AO94979 1220 aaKnown RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 HEXIM1O94992 359 aaKnown RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 CD4P01730 458 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 FGGP02679 453 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 ITGB3P05106 788 aa17.39■□□□□ 0.37
LDB3-208ENST00000623007 GSCP56915 257 aaPredicted RBP17.39■□□□□ 0.37
LDB3-208ENST00000623007 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms