RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 MTAPQ13126 283 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 RILPL1Q5EBL4 403 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 TSSK4Q6SA08 328 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 VITQ6UXI7 678 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 MAP4K3Q8IVH8 894 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 ZNF687Q8N1G0 1237 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 BEST2Q8NFU1 509 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 HAPLN2Q9GZV7 340 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 ZNF334Q9HCZ1 680 aaPredicted RBP25.91■■□□□ 1.74
CPSF1-214ENST00000622776 PRMT8Q9NR22 394 aaPredicted RBP25.91■■□□□ 1.74
CPSF1-214ENST00000622776 KCND2Q9NZV8 630 aa25.91■■□□□ 1.74
CPSF1-214ENST00000622776 NDRG2Q9UN36 371 aaKnown RBP25.91■■□□□ 1.74
CPSF1-214ENST00000622776 TTC26A0AVF1 554 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 LILRB5O75023 590 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 OAZ2O95190 189 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 PLA2G4BP0C869 781 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 GJA1P17302 382 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 LRPAP1P30533 357 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 GDI1P31150 447 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 VIPR2P41587 438 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 ZBTB6Q15916 424 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 DEPDC1BQ8WUY9 529 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 KIF12Q96FN5 646 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 TRPV4Q9HBA0 871 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 TRPV5Q9NQA5 729 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 DLL3Q9NYJ7 618 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 KIF3AQ9Y496 699 aa25.9■■□□□ 1.74
CPSF1-214ENST00000622776 TIMM13Q9Y5L4 95 aaPredicted RBP25.9■■□□□ 1.74
CPSF1-214ENST00000622776 NPHP3-ACAD11A0A0J9YXS1 232 aa25.89■■□□□ 1.74
CPSF1-214ENST00000622776 CACNB1Q02641 598 aaPredicted RBP25.89■■□□□ 1.74
CPSF1-214ENST00000622776 ZSCAN18Q8TBC5 510 aaPredicted RBP25.89■■□□□ 1.74
CPSF1-214ENST00000622776 BICD1Q96G01 975 aa25.89■■□□□ 1.74
CPSF1-214ENST00000622776 CDK5RAP3Q96JB5 506 aa25.89■■□□□ 1.74
CPSF1-214ENST00000622776 CHRDQ9H2X0 955 aa25.89■■□□□ 1.74
CPSF1-214ENST00000622776 LARSQ9P2J5 1176 aaKnown RBP25.89■■□□□ 1.74
CPSF1-214ENST00000622776 UBQLN1Q9UMX0 589 aaKnown RBP25.89■■□□□ 1.74
CPSF1-214ENST00000622776 YIPF1Q9Y548 306 aa25.89■■□□□ 1.74
CPSF1-214ENST00000622776 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.89■■□□□ 1.74
CPSF1-214ENST00000622776 DNAH14Q0VDD8 3507 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 MED19A0JLT2 244 aaPredicted RBP25.88■■□□□ 1.73
CPSF1-214ENST00000622776 VWA3AA6NCI4 1184 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 H0YCG3 227 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 VNN2O95498 520 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 CYP3A5P20815 502 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 AARSP49588 968 aaKnown RBP eCLIP25.88■■□□□ 1.73
CPSF1-214ENST00000622776 NCKAP1LP55160 1127 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 TEAD2Q15562 447 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 TMEM119Q4V9L6 283 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 HAUS6Q7Z4H7 955 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 OXCT2Q9BYC2 517 aaPredicted RBP25.88■■□□□ 1.73
CPSF1-214ENST00000622776 FAM126AQ9BYI3 521 aaPredicted RBP25.88■■□□□ 1.73
CPSF1-214ENST00000622776 EPC1Q9H2F5 836 aa25.88■■□□□ 1.73
CPSF1-214ENST00000622776 SMG5Q9UPR3 1016 aaKnown RBP25.88■■□□□ 1.73
CPSF1-214ENST00000622776 LACTBL1A8MY62 500 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 OR4Q2P0C623 313 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 TNFSF9P41273 254 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 PPP2R3AQ06190 1150 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 ARSHQ5FYA8 562 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 USP37Q86T82 979 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 MFSD6LQ8IWD5 586 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 SHKBP1Q8TBC3 707 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 FAM3CQ92520 227 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 KCNN1Q92952 543 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 PGLYRP2Q96PD5 576 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 GPR88Q9GZN0 384 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 PIAS3Q9Y6X2 628 aa25.87■■□□□ 1.73
CPSF1-214ENST00000622776 OR6C75A6NL08 312 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 ZNF263O14978 683 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 LIG4P49917 911 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 KYAT1Q16773 422 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 ARL6IP4Q66PJ3 421 aaKnown RBP25.86■■□□□ 1.73
CPSF1-214ENST00000622776 DSTYKQ6XUX3 929 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 MAMSTRQ6ZN01 415 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 GPR161Q8N6U8 529 aaKnown RBP25.86■■□□□ 1.73
CPSF1-214ENST00000622776 LRRC3Q9BY71 257 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 CRISPLD1Q9H336 500 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 SLITRK6Q9H5Y7 841 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 LMAN1LQ9HAT1 526 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 NCANO14594 1321 aa25.86■■□□□ 1.73
CPSF1-214ENST00000622776 HEPACAM2A8MVW5 462 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 XPOTO43592 962 aaKnown RBP25.85■■□□□ 1.73
CPSF1-214ENST00000622776 GUCY2FP51841 1108 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 DUSP4Q13115 394 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 GPR17Q13304 367 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 PLD1Q13393 1074 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 RSPO4Q2I0M5 234 aaPredicted RBP25.85■■□□□ 1.73
CPSF1-214ENST00000622776 SECISBP2LQ93073 1101 aaKnown RBP25.85■■□□□ 1.73
CPSF1-214ENST00000622776 E2F7Q96AV8 911 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 IER2Q9BTL4 223 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 DNAJC25Q9H1X3 360 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 ODF2LQ9ULJ1 636 aa25.85■■□□□ 1.73
CPSF1-214ENST00000622776 COL4A2P08572 1712 aa25.84■■□□□ 1.73
CPSF1-214ENST00000622776 EPHB3P54753 998 aa25.84■■□□□ 1.73
CPSF1-214ENST00000622776 ENOX2Q16206 610 aaKnown RBP25.84■■□□□ 1.73
CPSF1-214ENST00000622776 TMC8Q8IU68 726 aa25.84■■□□□ 1.73
CPSF1-214ENST00000622776 RPF1Q9H9Y2 349 aaKnown RBP25.84■■□□□ 1.73
CPSF1-214ENST00000622776 TBX20Q9UMR3 447 aa25.84■■□□□ 1.73
CPSF1-214ENST00000622776 TICRRQ7Z2Z1 1910 aa25.84■■□□□ 1.73
CPSF1-214ENST00000622776 A0A1W2PRU2 124 aa25.83■■□□□ 1.73
CPSF1-214ENST00000622776 ARNTLO00327 626 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms