RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 DIS3Q9Y2L1 958 aaKnown RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 EMSYQ7Z589 1322 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 K7ENM7 598 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 KRT13P13646 458 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 HALP42357 657 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 GCLMP48507 274 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 PPP3CAQ08209 521 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 DUPD1Q68J44 220 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 GRAMD4Q6IC98 578 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 KRT35Q92764 455 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 ELAC2Q9BQ52 826 aaKnown RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 ERP44Q9BS26 406 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 STRA6Q9BX79 667 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 FBXO9Q9UK97 447 aaPredicted RBP13.19□□□□□ -0.3
LITAF-221ENST00000622633 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 SNX24Q9Y343 169 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 ZNF711Q9Y462 761 aa13.19□□□□□ -0.3
LITAF-221ENST00000622633 CLRN2A0PK11 232 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 GM2AP17900 193 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 MARCKSL1P49006 195 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 PLTPP55058 493 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 ADARP55265 1226 aaKnown RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 SLC9A9Q8IVB4 645 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 MAP7D3Q8IWC1 876 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 ENDOVQ8N8Q3 282 aaKnown RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
LITAF-221ENST00000622633 MDM1Q8TC05 714 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 KAT5Q92993 513 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 SH2D3AQ9BRG2 576 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 TXLNGYQ9BZA5 131 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 MRPL11Q9Y3B7 192 aaKnown RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 ATP9AO75110 1047 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 VAMP7P51809 220 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 PTK7Q13308 1070 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 NEPROQ6NW34 567 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 KLC3Q6P597 504 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 IRGQQ8WZA9 623 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 HAUS1Q96CS2 278 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 C18orf8Q96DM3 657 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
LITAF-221ENST00000622633 CBWD1Q9BRT8 395 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 MIS12Q9H081 205 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 ZDHHC18Q9NUE0 388 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 KCND2Q9NZV8 630 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 USP20Q9Y2K6 914 aa13.18□□□□□ -0.3
LITAF-221ENST00000622633 TESPA1A2RU30 521 aaPredicted RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 PMS2P54278 862 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 MUM1Q2TAK8 710 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 TRMT1LQ7Z2T5 733 aaKnown RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 JAMLQ86YT9 394 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 LRRC34Q8IZ02 419 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 SLC7A5P1Q8MH63 180 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 PDCD7Q8N8D1 485 aaKnown RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 DQX1Q8TE96 717 aaKnown RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 CHURC1Q8WUH1 139 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 NMRK1Q9NWW6 199 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 BIRC5O15392 142 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 ITGB5P18084 799 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 MUTP22033 750 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 TBC1D10BQ4KMP7 808 aaPredicted RBP13.17□□□□□ -0.3
LITAF-221ENST00000622633 LIN52Q52LA3 116 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 PCDHB18PQ96TA0 734 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
LITAF-221ENST00000622633 FAM187AA6NFU0 413 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 KIAA0391O15091 583 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 NVLO15381 856 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 SGPL1O95470 568 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 CHRNA5P30532 468 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 GPC5P78333 572 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 RNASELQ05823 741 aaKnown RBP13.16□□□□□ -0.3
LITAF-221ENST00000622633 MESDQ14696 234 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 PPP2R5EQ16537 467 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 ZDHHC24Q6UX98 284 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
LITAF-221ENST00000622633 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms