RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ROPN1Q9HAT0 212 aaPredicted RBP13.56□□□□□ -0.24
MSH6-215ENST00000622629 NOD1Q9Y239 953 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 AGPSO00116 658 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DCTN3O75935 186 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 PSMC4P43686 418 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 PHKA2P46019 1235 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DRP2Q13474 957 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DGKZQ13574 1117 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 SCFD2Q8WU76 684 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 GGA3Q9NZ52 723 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 FZD1Q9UP38 647 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 LCA5LO95447 670 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 GJB6O95452 261 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 SDC4P31431 198 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 FLT3P36888 993 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 TAF11Q15544 211 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 SH3BP5LQ7L8J4 393 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 PCGF5Q86SE9 256 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DDX23Q9BUQ8 820 aaKnown RBP13.56□□□□□ -0.24
MSH6-215ENST00000622629 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 KLC2Q9H0B6 622 aa13.56□□□□□ -0.24
MSH6-215ENST00000622629 DDX56Q9NY93 547 aaKnown RBP13.56□□□□□ -0.24
MSH6-215ENST00000622629 NOP53Q9NZM5 478 aaKnown RBP13.56□□□□□ -0.24
MSH6-215ENST00000622629 DDX20Q9UHI6 824 aaKnown RBP13.56□□□□□ -0.24
MSH6-215ENST00000622629 IGKV6D-41A0A0C4DH26 115 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 FAM47DPA6NHR8 397 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 PIK3CDO00329 1044 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 ATP9AO75110 1047 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 OATP04181 439 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 OSBPP22059 807 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 SGSM1Q2NKQ1 1148 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 MAP7D1Q3KQU3 841 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 APOBEC3FQ8IUX4 373 aaKnown RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 RANBP17Q9H2T7 1088 aaKnown RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 LRRC4Q9HBW1 653 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 TXNP10599 105 aaKnown RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 KITP10721 976 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 ERFP50548 548 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 CCNA1P78396 465 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 ZBTB45Q96K62 511 aaPredicted RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 SMYD2Q9NRG4 433 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 PPARGC1AQ9UBK2 798 aaKnown RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 TPX2Q9ULW0 747 aaKnown RBP13.55□□□□□ -0.24
MSH6-215ENST00000622629 AGAP1Q9UPQ3 857 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 SHBGP04278 402 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 ADRB2P07550 413 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 BACE1P56817 501 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 PPATQ06203 517 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 KLHL38Q2WGJ6 581 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 ZFP69BQ9UJL9 534 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 NUB1Q9Y5A7 615 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 MYH10P35580 1976 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 CFAP69A5D8W1 941 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 MAP3K6O95382 1288 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 RBP3P10745 1247 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 GARTP22102 1010 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 GCKP35557 465 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 NXNQ6DKJ4 435 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 ZNF677Q86XU0 584 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 NIF3L1Q9GZT8 377 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 CHST7Q9NS84 486 aa13.55□□□□□ -0.24
MSH6-215ENST00000622629 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
MSH6-215ENST00000622629 C3orf62Q6ZUJ4 267 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 HES6Q96HZ4 224 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 SCYL1Q96KG9 808 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 G3BP2Q9UN86 482 aaKnown RBP13.54□□□□□ -0.24
MSH6-215ENST00000622629 CHMP2BQ9UQN3 213 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 CCDC195A0A1B0GUA6 201 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 M0QZ92 97 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 LPXNO60711 386 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 APRTP07741 180 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 SLC12A2P55011 1212 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 ROR1Q01973 937 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
MSH6-215ENST00000622629 PSMD6Q15008 389 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 CLEC16AQ2KHT3 1053 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 FAM83AQ86UY5 434 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 MCOLN2Q8IZK6 566 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 ERP27Q96DN0 273 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 MRIQ9BWK5 157 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 FAM129AQ9BZQ8 928 aa13.54□□□□□ -0.24
MSH6-215ENST00000622629 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms