RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TMEM35BQ8NCS4 154 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 AGPAT3Q9NRZ7 376 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 APEX2Q9UBZ4 518 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM198AQ9UFP1 575 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 NFIBO00712 420 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 PLSCR1O15162 318 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ATMINO43313 823 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 CTNND1O60716 968 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ENDOD1O94919 500 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 FTLP02792 175 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 PRKCBP05771 671 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ERFP50548 548 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 SLMAPQ14BN4 828 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 TMED2Q15363 201 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 TAOK1Q7L7X3 1001 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 RPUSD2Q8IZ73 545 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 CACNA2D3Q8IZS8 1091 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 BEST2Q8NFU1 509 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 SLC20A1Q8WUM9 679 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ZNF512Q96ME7 567 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 POLR3CQ9BUI4 534 aaPredicted RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 KCNH7Q9NS40 1196 aa8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 AFF4Q9UHB7 1163 aaKnown RBP8.75□□□□□ -1.01
PTPDC1-204ENST00000620992 ASB14A6NK59 587 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 TISP43B9A030 160 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 KBTBD13C9JR72 458 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 TMEM253P0C7T8 217 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ATP5DP30049 168 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 THPOP40225 353 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SH2D4BQ5SQS7 431 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 IL31Q6EBC2 164 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SPOPLQ6IQ16 392 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 THEM5Q8N1Q8 247 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 LRRC43Q8N309 656 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 OR6P1Q8NGX9 317 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 HES6Q96HZ4 224 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 FAM167AQ96KS9 214 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 MBOAT7Q96N66 472 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SEPT5Q99719 369 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 WDR18Q9BV38 432 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 MRPL4Q9BYD3 311 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 GBA2Q9HCG7 927 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 MRPL47Q9HD33 250 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ERVK-5Q9HDB9 667 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 OLFML3Q9NRN5 406 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SRCAPQ6ZRS2 3230 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 CDK5RAP2Q96SN8 1893 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 PASKQ96RG2 1323 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 TMEM150BA6NC51 233 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 WDR46O15213 610 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 GUCY2CP25092 1073 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 WEE1P30291 646 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 PRKCEQ02156 737 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 JADE1Q6IE81 842 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 EFCAB12Q6NXP0 572 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 OTOP1Q7RTM1 612 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SIAH1Q8IUQ4 282 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 MKL1Q969V6 931 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 C18orf8Q96DM3 657 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ALG6Q9Y672 507 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ASCC3Q8N3C0 2202 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 A0A0A6YYK5 440 aaPredicted RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 CAND2O75155 1236 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 B3GAT3O94766 335 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 BAG2O95816 211 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 IRF1P10914 325 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 DPY19L2P1Q6NXN4 242 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 CCDC62Q6P9F0 684 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 C1orf186Q6ZWK4 172 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ZNF720Q7Z2F6 126 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 MAIP1Q8WWC4 291 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 RAPGEF5Q92565 580 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ZDHHC15Q96MV8 337 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 PARK7Q99497 189 aaKnown RBP8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 INTUQ9ULD6 942 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 EP400Q96L91 3159 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 UBE4BO95155 1302 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 BTAF1O14981 1849 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 PRRG1O14668 218 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 SLC26A4O43511 780 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 MED7O43513 233 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ENTPD3O75355 529 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 GNA15P30679 374 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 GRIK1P39086 918 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 QPCTQ16769 361 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 DUOXA2Q1HG44 320 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 FBXO25Q8TCJ0 367 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 NEK9Q8TD19 979 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 USP33Q8TEY7 942 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 ALG3Q92685 438 aa8.74□□□□□ -1.01
PTPDC1-204ENST00000620992 GTPBP10A4D1E9 387 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 SCAMP3O14828 347 aaKnown RBP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 EIF3DO15371 548 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 ARP10275 920 aa8.73□□□□□ -1.01
PTPDC1-204ENST00000620992 FGFR4P22455 802 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms