RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 EPHB2P29323 1055 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 SLC39A4Q6P5W5 647 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 ZNF449Q6P9G9 518 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 ENOSF1Q7L5Y1 443 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 LDHDQ86WU2 507 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 LRRC8CQ8TDW0 803 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 FAM84AQ96KN4 292 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 TTC25Q96NG3 672 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 CSRNP1Q96S65 589 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 TIPINQ9BVW5 301 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 FHDC1Q9C0D6 1143 aaPredicted RBP20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 CYLDQ9NQC7 956 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 ZFATQ9P243 1243 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 ASTN2O75129 1339 aaPredicted RBP20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 CBX6O95503 412 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 MYCNP04198 464 aaPredicted RBP20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 CYP1A1P04798 512 aaPredicted RBP20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 FGFR1P11362 822 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 NSFP46459 744 aaKnown RBP20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 LMNB2Q03252 620 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 EXD1Q8NHP7 514 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 CHURC1Q8WUH1 139 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 NUDCD1Q96RS6 583 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 SMC6Q96SB8 1091 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 COL20A1Q9P218 1284 aa20.73■□□□□ 0.91
PDLIM3-212ENST00000620787 TRAFD1O14545 582 aaPredicted RBP20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 ENTPD3O75355 529 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 KRT15P19012 456 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 FKBP1AP62942 108 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 CMPK2Q5EBM0 449 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 WASHC2DQ5SRD0 308 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 FAM102BQ5T8I3 360 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 STRIP1Q5VSL9 837 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 TRIM68Q6AZZ1 485 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 ANO7Q6IWH7 933 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 ZNF677Q86XU0 584 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 AGO4Q9HCK5 861 aaKnown RBP20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 SENP1Q9P0U3 644 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 PCDHB2Q9Y5E7 798 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 LIASO43766 372 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 TYROBPO43914 113 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 PECAM1P16284 738 aaPredicted RBP20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 GJC1P36383 396 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 HSD17B4P51659 736 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 SPDYAQ5MJ70 313 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 ASAP3Q8TDY4 903 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 ZNF483Q8TF39 744 aaPredicted RBP20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 SERPINA10Q9UK55 444 aa20.72■□□□□ 0.91
PDLIM3-212ENST00000620787 EIF4E1BA6NMX2 242 aaKnown RBP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 ZSCAN5DPP0CG00 497 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 CA4P22748 312 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 NPTX2P47972 431 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 TKFCQ3LXA3 575 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 HP1BP3Q5SSJ5 553 aaPredicted RBP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 OTOAQ7RTW8 1153 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 TTC8Q8TAM2 541 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 ZNF622Q969S3 477 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 TLE6Q9H808 572 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 DNPEPQ9ULA0 475 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 NPR1P16066 1061 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 ATP6V1C1P21283 382 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 PLA2G4FQ68DD2 849 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 NIPA1Q7RTP0 329 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 TRMT1LQ7Z2T5 733 aaKnown RBP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 CCDC125Q86Z20 511 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 SH3TC2Q8TF17 1288 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 C11orf70Q9BRQ4 267 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 DEFB129Q9H1M3 183 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 DENND2DQ9H6A0 471 aaPredicted RBP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 C1orf112Q9NSG2 853 aa20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 COL2A1P02458 1487 aaPredicted RBP20.71■□□□□ 0.91
PDLIM3-212ENST00000620787 WDR81Q562E7 1941 aa20.7■□□□□ 0.91
PDLIM3-212ENST00000620787 A0A1W2PPM1 405 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 DENND3A2RUS2 1198 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 KIF3CO14782 793 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 ZC3H11AO75152 810 aaKnown RBP eCLIP20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 CFHP08603 1231 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 DSG3P32926 999 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 RASSF2P50749 326 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 MAMLD1Q13495 774 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 TAF1BQ53T94 588 aaPredicted RBP20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 FBXO28Q9NVF7 368 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 KLHL11Q9NVR0 708 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 USTQ9Y2C2 406 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 NFASCO94856 1347 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 ETS1P14921 441 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 PEX19P40855 299 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 SLC45A4Q5BKX6 768 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 CAPN12Q6ZSI9 719 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 NLRP9Q7RTR0 991 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 C4orf19Q8IY42 314 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 SUPT20HQ8NEM7 779 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 POMGNT1Q8WZA1 660 aa20.7■□□□□ 0.9
PDLIM3-212ENST00000620787 ZNF75CPQ92670 426 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms