RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 TSEN2Q8NCE0 465 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 SLC20A1Q8WUM9 679 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 CCDC124Q96CT7 223 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 SGSM3Q96HU1 749 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 RMDN2Q96LZ7 410 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 SERPINB12Q96P63 405 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 OSBPL8Q9BZF1 889 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 XAB2Q9HCS7 855 aaKnown RBP8.79□□□□□ -1
ALMS1-208ENST00000620466 AIPL1Q9NZN9 384 aa8.79□□□□□ -1
ALMS1-208ENST00000620466 KIAA0391O15091 583 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 DGAT1O75907 488 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 TAL1P17542 331 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 DUOXA2Q1HG44 320 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 ANO4Q32M45 955 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 SCN4BQ8IWT1 228 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 PDCD6IPQ8WUM4 868 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 TLR10Q9BXR5 811 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 SIK3Q9Y2K2 1263 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 ZBBXA8MT70 800 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 SCTRP47872 440 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 EMC2Q15006 297 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 TTMPQ5BVD1 217 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 FSCBQ5H9T9 825 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 PIDD1Q9HB75 910 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 KLHL8Q9P2G9 620 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 TSR3Q9UJK0 312 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 TBX20Q9UMR3 447 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 KCNN4O15554 427 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 CYTH3O43739 400 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 KLRC4O43908 158 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 EXTL3O43909 919 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 ARHGDIAP52565 204 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 ALDH18A1P54886 795 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 COPS2P61201 443 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 AP1B1Q10567 949 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 NCOA4Q13772 614 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 HEATR6Q6AI08 1181 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 AGGF1Q8N302 714 aaeCLIP8.78□□□□□ -1
ALMS1-208ENST00000620466 ERP27Q96DN0 273 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 GJD4Q96KN9 370 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 TSSK1BQ9BXA7 367 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 MOV10L1Q9BXT6 1211 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 FAM129AQ9BZQ8 928 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 SLC7A5P2Q9GIP4 190 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 FAF1Q9UNN5 650 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 CREB3O43889 395 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 PRKCBP05771 671 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 ENO1P06733 434 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 BCAR1P56945 870 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 WDR59Q6PJI9 974 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 APOBEC3FQ8IUX4 373 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 TMEM139Q8IV31 216 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 BEST2Q8NFU1 509 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 ITGA4P13612 1032 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 GNL1P36915 607 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 RECQLP46063 649 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 BAATQ14032 418 aaPredicted RBP8.78□□□□□ -1
ALMS1-208ENST00000620466 ZNF677Q86XU0 584 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 ATG4AQ8WYN0 398 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 NCLNQ969V3 563 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 DRC3Q9H069 523 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 NOD2Q9HC29 1040 aa8.78□□□□□ -1
ALMS1-208ENST00000620466 RCCD1A6NED2 376 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 TMEM247A6NEH6 219 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 H3BRJ5 948 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 PDE2AO00408 941 aaPredicted RBP8.77□□□□□ -1
ALMS1-208ENST00000620466 CES2O00748 559 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 WNT7AO00755 349 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 KCNA4P22459 653 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 CCND1P24385 295 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 ADORA2BP29275 332 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 PIGHQ14442 188 aaPredicted RBP8.77□□□□□ -1
ALMS1-208ENST00000620466 MXD4Q14582 209 aaPredicted RBP8.77□□□□□ -1
ALMS1-208ENST00000620466 MFSD14CQ5VZR4 134 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 LVRNQ6Q4G3 990 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 PCDHB2Q9Y5E7 798 aa8.77□□□□□ -1
ALMS1-208ENST00000620466 ARP10275 920 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 HOXD10P28358 340 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 TAF1BQ53T94 588 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 TWF2Q6IBS0 349 aaKnown RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 ZBTB18Q99592 522 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 FAM96AQ9H5X1 160 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 FBXO40Q9UH90 709 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 WTIPA6NIX2 430 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 KPNA7A9QM74 516 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 VEGFAP15692 232 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 PRKCEQ02156 737 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 IMPG1Q17R60 797 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 CAPRIN2Q6IMN6 1127 aaKnown RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 RIBC1Q8N443 379 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 ACSF2Q96CM8 615 aaPredicted RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 CCDC138Q96M89 665 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 GTF3C4Q9UKN8 822 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 NFAT5O94916 1531 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 ASAP2O43150 1006 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 PGM1P36871 562 aa8.77□□□□□ -1.01
ALMS1-208ENST00000620466 PAPOLAP51003 745 aaKnown RBP8.77□□□□□ -1.01
ALMS1-208ENST00000620466 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms