RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 KCNJ1P48048 391 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 ALDH5A1P51649 535 aaPredicted RBP10.53□□□□□ -0.72
CDH23-213ENST00000619887 CORO7P57737 925 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 PSMC1P62191 440 aaKnown RBP10.53□□□□□ -0.72
CDH23-213ENST00000619887 FMO1Q01740 532 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 TFDP2Q14188 446 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 CASC4Q6P4E1 433 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 ARHGEF2Q92974 986 aaKnown RBP10.53□□□□□ -0.72
CDH23-213ENST00000619887 BORCS6Q96GS4 357 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 BTBD6Q96KE9 485 aa10.53□□□□□ -0.72
CDH23-213ENST00000619887 POC1B-GALNT4F8VUJ3 575 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 PPATQ06203 517 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 TTMPQ5BVD1 217 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 ATF7IP2Q5U623 682 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 ANKRD13AQ8IZ07 590 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 GIMAP7Q8NHV1 300 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 C12orf42Q96LP6 360 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.72
CDH23-213ENST00000619887 SAYSD1Q9NPB0 183 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 PCYOX1Q9UHG3 505 aa10.52□□□□□ -0.72
CDH23-213ENST00000619887 H7C0C1 242 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 ADCY3O60266 1144 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 ATP5OP48047 213 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 ZNF844Q08AG5 666 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 SLC29A2Q14542 456 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 TMED2Q15363 201 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 SPOUT1Q5T280 376 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 C7orf31Q8N865 590 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 SPATC1LQ9H0A9 340 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 ABT1Q9ULW3 272 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 NUB1Q9Y5A7 615 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 DDX3YO15523 660 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 PRPSAP2O60256 369 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 PYGMP11217 842 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 ARL4CP56559 192 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 MXRA7P84157 204 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 TMEM132BQ14DG7 1078 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 ERO1BQ86YB8 467 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 EXD1Q8NHP7 514 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 PRPF31Q8WWY3 499 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 FAM149B1Q96BN6 582 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 XPO6Q96QU8 1125 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 NTPCRQ9BSD7 190 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 CALN1Q9BXU9 219 aa10.52□□□□□ -0.73
CDH23-213ENST00000619887 DNAJC17Q9NVM6 304 aaKnown RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 AJAP1Q9UKB5 411 aaPredicted RBP10.52□□□□□ -0.73
CDH23-213ENST00000619887 CSPG5O95196 566 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 DYNLT1P63172 113 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 NFX1Q12986 1120 aaKnown RBP10.51□□□□□ -0.73
CDH23-213ENST00000619887 ZACNQ401N2 412 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 RIOX2Q8IUF8 465 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 PDIK1LQ8N165 341 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 KRT35Q92764 455 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 CYFIP2Q96F07 1278 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 KREMEN1Q96MU8 473 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 ZWILCHQ9H900 591 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 PPCSQ9HAB8 311 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 STXBP5LQ9Y2K9 1186 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 MTA2O94776 668 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 RALAP11233 206 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 KRT3P12035 628 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 KCNA2P16389 499 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 GTF2A1P52655 376 aaPredicted RBP10.51□□□□□ -0.73
CDH23-213ENST00000619887 NLRP11P59045 1033 aaKnown RBP10.51□□□□□ -0.73
CDH23-213ENST00000619887 SARNPP82979 210 aaKnown RBP10.51□□□□□ -0.73
CDH23-213ENST00000619887 MCL1Q07820 350 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 ABHD15Q6UXT9 468 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 HACE1Q8IYU2 909 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 MED10Q9BTT4 135 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 COQ4Q9Y3A0 265 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 CAPN9O14815 690 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 CDH16O75309 829 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 PPFIA2O75334 1257 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 DUPD1Q68J44 220 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 VSIG1Q86XK7 387 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 CCDC125Q86Z20 511 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 GBP7Q8N8V2 638 aaPredicted RBP10.51□□□□□ -0.73
CDH23-213ENST00000619887 MYCBPAPQ8TBZ2 947 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 BCAS3Q9H6U6 928 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 ERAP1Q9NZ08 941 aa10.51□□□□□ -0.73
CDH23-213ENST00000619887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
CDH23-213ENST00000619887 TROVE2P10155 538 aaKnown RBP eCLIP10.5□□□□□ -0.73
CDH23-213ENST00000619887 GPS1Q13098 491 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 STILQ15468 1287 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 CCNG2Q16589 344 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 CCDC14Q49A88 953 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 GPAT2Q6NUI2 795 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 MPZL3Q6UWV2 235 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 GPC2Q8N158 579 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 LRRC8CQ8TDW0 803 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 SERPINB12Q96P63 405 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 MCEEQ96PE7 176 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 SENP1Q9P0U3 644 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 ARHGAP28Q9P2N2 729 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 PHF20L1A8MW92 1017 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 ANKRD65E5RJM6 399 aa10.5□□□□□ -0.73
CDH23-213ENST00000619887 AGPSO00116 658 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms