RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CKAP2	Q8WWK9	683 aa		15.34	■□□□□ 0.05
SMTN-223	ENST00000619644	RBM15	Q96T37	977 aa	Known RBP eCLIP	15.34	■□□□□ 0.05
SMTN-223	ENST00000619644	TRAIP	Q9BWF2	469 aa		15.34	■□□□□ 0.05
SMTN-223	ENST00000619644	PITPNM3	Q9BZ71	974 aa		15.34	■□□□□ 0.05
SMTN-223	ENST00000619644	ZNF277	Q9NRM2	450 aa	Predicted RBP	15.34	■□□□□ 0.05
SMTN-223	ENST00000619644	CPSF2	Q9P2I0	782 aa	Known RBP	15.34	■□□□□ 0.05
SMTN-223	ENST00000619644	SIPA1L1	O43166	1804 aa		15.33	■□□□□ 0.05
SMTN-223	ENST00000619644	UNC5C	O95185	931 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	MYBL1	P10243	752 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	GNAZ	P19086	355 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	CYP24A1	Q07973	514 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	GNPTAB	Q3T906	1256 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	BRDT	Q58F21	947 aa	Predicted RBP	15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	ANO7	Q6IWH7	933 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	MCF2L2	Q86YR7	1114 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	FBF1	Q8TES7	1133 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	ANKRD27	Q96NW4	1050 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	RAB3IP	Q96QF0	476 aa	Predicted RBP	15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	TBC1D22B	Q9NU19	505 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	MROH7	Q68CQ1	1323 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	ETS1	P14921	441 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	RAB27A	P51159	221 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	TAS2R40	P59535	323 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	DNAJC3	Q13217	504 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	LIN9	Q5TKA1	542 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	VSIG1	Q86XK7	387 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	GPD1L	Q8N335	351 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	TSC22D3	Q99576	134 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	OSBPL8	Q9BZF1	889 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	TELO2	Q9Y4R8	837 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	UBR3	Q6ZT12	1888 aa		15.33	■□□□□ 0.04
SMTN-223	ENST00000619644	TLR3	O15455	904 aa	Known RBP	15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	SKIV2L2	P42285	1042 aa	Known RBP	15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	GPC3	P51654	580 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	DYNLT1	P63172	113 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	ATRNL1	Q5VV63	1379 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	ARHGEF18	Q6ZSZ5	1173 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	DDX1	Q92499	740 aa	Known RBP	15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	RNPEPL1	Q9HAU8	725 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	LY75	O60449	1722 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	MTA2	O94776	668 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	PDHA1	P08559	390 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	POTEJ	P0CG39	1038 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	PCK1	P35558	622 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	TUB	P50607	506 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	RAD23B	P54727	409 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	ECHDC2	Q86YB7	292 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	SPOCK2	Q92563	424 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	WDR91	A4D1P6	747 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	SPDYE5	A6NIY4	337 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	SMIM24	O75264	130 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	NPM3	O75607	178 aa	Known RBP	15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	ASNS	P08243	561 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	GNAT1	P11488	350 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	PSMC4	P43686	418 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	HSD17B4	P51659	736 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	NCKAP1L	P55160	1127 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	RNASEL	Q05823	741 aa	Known RBP	15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	PGM5	Q15124	567 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	SLC39A4	Q6P5W5	647 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	MAIP1	Q8WWC4	291 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	CLEC4D	Q8WXI8	215 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	LRRC42	Q9Y546	428 aa		15.32	■□□□□ 0.04
SMTN-223	ENST00000619644	ZNF536	O15090	1300 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	LRRIQ4	A6NIV6	560 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	MAP3K13	O43283	966 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	HLA-DRA	P01903	254 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	GNA15	P30679	374 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	PAPOLA	P51003	745 aa	Known RBP	15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	NBPF20	Q3BBV1	942 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	RNF43	Q68DV7	783 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	MAP4K3	Q8IVH8	894 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	C12orf56	Q8IXR9	622 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	CCDC89	Q8N998	374 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	PAPOLB	Q9NRJ5	636 aa	Known RBP	15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	ADGRA3	Q8IWK6	1321 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	TP73	O15350	636 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	GRIN3B	O60391	1043 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	PEX11A	O75192	247 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	CDH16	O75309	829 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	MAPT	P10636	758 aa	Known RBP	15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	CALB2	P22676	271 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	CETN2	P41208	172 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	MAGEA4	P43358	317 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	MXRA7	P84157	204 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	FAM182A	Q5T1J6	154 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	PCNX4	Q63HM2	1172 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	ZNF449	Q6P9G9	518 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	LMNTD2	Q8IXW0	634 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	C4orf19	Q8IY42	314 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	TMEM143	Q96AN5	459 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	ZBTB45	Q96K62	511 aa	Predicted RBP	15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	PCDHB2	Q9Y5E7	798 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	UBIAD1	Q9Y5Z9	338 aa		15.31	■□□□□ 0.04
SMTN-223	ENST00000619644	LRRD1	A4D1F6	860 aa		15.3	■□□□□ 0.04
SMTN-223	ENST00000619644	GPS1	Q13098	491 aa		15.3	■□□□□ 0.04
SMTN-223	ENST00000619644	PTK6	Q13882	451 aa		15.3	■□□□□ 0.04
SMTN-223	ENST00000619644	BAAT	Q14032	418 aa	Predicted RBP	15.3	■□□□□ 0.04
SMTN-223	ENST00000619644	ANKMY2	Q8IV38	441 aa		15.3	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms