RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CXorf38Q8TB03 319 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 MICAL1Q8TDZ2 1067 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM174Q8WUU8 243 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 POMGNT1Q8WZA1 660 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 NXPE3Q969Y0 559 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 RNF25Q96BH1 459 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 EEF2KMTQ96G04 330 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 GSDMAQ96QA5 445 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 RPS6KC1Q96S38 1066 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 UHRF1Q96T88 793 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TCF25Q9BQ70 676 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 FAM213AQ9BRX8 229 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TUBB2BQ9BVA1 445 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 KCNH6Q9H252 994 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TLE6Q9H808 572 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 ALG13Q9NP73 1137 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 MRPL17Q9NRX2 175 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 EXOC7Q9UPT5 735 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TRAF3IP3Q9Y228 551 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 USTQ9Y2C2 406 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 PRG3Q9Y2Y8 225 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 DERAQ9Y315 318 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 ZFP37Q9Y6Q3 630 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 VPS13AQ96RL7 3174 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 SF3B1O75533 1304 aaKnown RBP eCLIP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TDRD15B5MCY1 1934 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 MYO15AQ9UKN7 3530 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 PLXNA4Q9HCM2 1894 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 COL4A4P53420 1690 aaPredicted RBP5.67□□□□□ -1.5
SHMT1-211ENST00000618902 I3L4J1 428 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 PDXKO00764 312 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 SPTLC1O15269 473 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ATP8B1O43520 1251 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 AKAP3O75969 853 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 CSPG5O95196 566 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 KIF4AO95239 1232 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 LDHAP00338 332 aaKnown RBP5.67□□□□□ -1.5
SHMT1-211ENST00000618902 NR3C1P04150 777 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 TNNT1P13805 278 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 MTHFRP42898 656 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 NUBP1P53384 320 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 STX17P56962 302 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ERVFC1P60507 584 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 CYP24A1Q07973 514 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 SMARCB1Q12824 385 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 NFIL3Q16649 462 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 TPD52L1Q16890 204 aaPredicted RBP5.67□□□□□ -1.5
SHMT1-211ENST00000618902 DPCR1Q3MIW9 517 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 TAF3Q5VWG9 929 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ANKRD40Q6AI12 368 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 JADE1Q6IE81 842 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 PTCRAQ6ISU1 281 aaPredicted RBP5.67□□□□□ -1.5
SHMT1-211ENST00000618902 TTI2Q6NXR4 508 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ARMCX5Q6P1M9 558 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 DCLRE1AQ6PJP8 1040 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 HS2ST1Q7LGA3 356 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 LUZP1Q86V48 1076 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 SLC9A9Q8IVB4 645 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ADHFE1Q8IWW8 467 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 RNF168Q8IYW5 571 aaPredicted RBP5.67□□□□□ -1.5
SHMT1-211ENST00000618902 GPD1LQ8N335 351 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 RDH13Q8NBN7 331 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ADAMTS19Q8TE59 1207 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 AUTS2Q8WXX7 1259 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ANKRD7Q92527 254 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ZNF516Q92618 1163 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ELMO3Q96BJ8 720 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 FAM212AQ96EL1 285 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 BORCS6Q96GS4 357 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 MSLNLQ96KJ4 702 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 B3GALT6Q96L58 329 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 MFSD14AQ96MC6 490 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 RIPOR3Q96MK2 946 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 GPR62Q9BZJ7 368 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM206Q9H813 350 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 RPF1Q9H9Y2 349 aaKnown RBP5.67□□□□□ -1.5
SHMT1-211ENST00000618902 RXFP1Q9HBX9 757 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 KIAA1586Q9HCI6 787 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 PDE11AQ9HCR9 933 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ENTPD7Q9NQZ7 604 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 CHST7Q9NS84 486 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 OGFRQ9NZT2 677 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 SIX4Q9UIU6 781 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 CD207Q9UJ71 328 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 ADAM28Q9UKQ2 775 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 CTNND2Q9UQB3 1225 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 NR2E1Q9Y466 385 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 VWA8A3KMH1 1905 aa5.67□□□□□ -1.5
SHMT1-211ENST00000618902 MUC6Q6W4X9 2439 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 DOCK6Q96HP0 2047 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ANO9A1A5B4 782 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 C2orf71A6NGG8 1288 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 C19orf67A6NJJ6 358 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 LRRIQ3A6PVS8 624 aaPredicted RBP5.66□□□□□ -1.5
SHMT1-211ENST00000618902 SYN3O14994 580 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 ZSCAN12O43309 604 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 LILRB3O75022 631 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 LRRN2O75325 713 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 TADA2AO75478 443 aa5.66□□□□□ -1.5
SHMT1-211ENST00000618902 KIF20AO95235 890 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms