RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ZC3H11AO75152 810 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNAP47-213ENST00000617596 THP07101 528 aa17.45■□□□□ 0.38
SNAP47-213ENST00000617596 SKIP12755 728 aa17.45■□□□□ 0.38
SNAP47-213ENST00000617596 RBP5P82980 135 aa17.45■□□□□ 0.38
SNAP47-213ENST00000617596 NAA30Q147X3 362 aaPredicted RBP17.45■□□□□ 0.38
SNAP47-213ENST00000617596 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
SNAP47-213ENST00000617596 C7orf61Q8IZ16 206 aa17.45■□□□□ 0.38
SNAP47-213ENST00000617596 PAAF1Q9BRP4 392 aa17.45■□□□□ 0.38
SNAP47-213ENST00000617596 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
SNAP47-213ENST00000617596 CASTOR2A6NHX0 329 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 PARNO95453 639 aaKnown RBP17.44■□□□□ 0.38
SNAP47-213ENST00000617596 EOMESO95936 686 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 CALCAP01258 141 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 WEE2P0C1S8 567 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 SYN1P17600 705 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 MFAP3P55082 362 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 CUL2Q13617 745 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 ELF2Q15723 593 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 HGSNATQ68CP4 663 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 MFSD5Q6N075 450 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 TMCO2Q7Z6W1 182 aaPredicted RBP17.44■□□□□ 0.38
SNAP47-213ENST00000617596 ZNF446Q9NWS9 450 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 ARHGAP20Q9P2F6 1191 aa17.44■□□□□ 0.38
SNAP47-213ENST00000617596 RALGAPA2Q2PPJ7 1873 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 FAM170AA1A519 330 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 UPP2O95045 317 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 CD58P19256 250 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 SOX5P35711 763 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 STAT1P42224 750 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 ASPAP45381 313 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 CDH8P55286 799 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 GCNT1Q02742 428 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 ASIC2Q16515 512 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 MEA1Q16626 185 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 RAD9BQ6WBX8 426 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 IRF2BP2Q7Z5L9 587 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 ZNHIT6Q9NWK9 470 aaKnown RBP17.43■□□□□ 0.38
SNAP47-213ENST00000617596 TMEM161AQ9NX61 479 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 PCDHB7Q9Y5E2 793 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 SPTLC1O15269 473 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 CCP110O43303 1012 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 EVI5O60447 810 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 B4GALT3O60512 393 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 HNRNPH3P31942 346 aaKnown RBP17.43■□□□□ 0.38
SNAP47-213ENST00000617596 CLCNKBP51801 687 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 TDRD12Q587J7 1177 aaKnown RBP17.43■□□□□ 0.38
SNAP47-213ENST00000617596 ZNF667Q5HYK9 610 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 CNKSR3Q6P9H4 555 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 GLB1LQ6UWU2 654 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 ABHD8Q96I13 439 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 NIF3L1Q9GZT8 377 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 SMYD3Q9H7B4 428 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 AIPL1Q9NZN9 384 aa17.43■□□□□ 0.38
SNAP47-213ENST00000617596 ANO9A1A5B4 782 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 PIRO00625 290 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 CYP26A1O43174 497 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 ZRANB2O95218 330 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNAP47-213ENST00000617596 KRT5P13647 590 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 RFX1P22670 979 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 IKBKEQ14164 716 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 ZNF280BQ86YH2 543 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 TMEM199Q8N511 208 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 SHC3Q92529 594 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 BADQ92934 168 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 DESI2Q9BSY9 194 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 UBXN6Q9BZV1 441 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 SDCBP2Q9H190 292 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 HAUS4Q9H6D7 363 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 YY1AP1Q9H869 796 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 UBN1Q9NPG3 1134 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 HCSTQ9UBK5 93 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 PRKAG2Q9UGJ0 569 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 FEZ2Q9UHY8 353 aaPredicted RBP17.42■□□□□ 0.38
SNAP47-213ENST00000617596 LRFN2Q9ULH4 789 aa17.42■□□□□ 0.38
SNAP47-213ENST00000617596 F8W810 466 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 XPOTO43592 962 aaKnown RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 CYP3A5P20815 502 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 ACO1P21399 889 aaKnown RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 FECHP22830 423 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 KLHL30Q0D2K2 578 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 PAN2Q504Q3 1202 aaKnown RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 CYP26C1Q6V0L0 522 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 TOGARAM2Q6ZUX3 1019 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 CRIPAKQ8N1N5 446 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 MMS19Q96T76 1030 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 NHEJ1Q9H9Q4 299 aaPredicted RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 SLC38A7Q9NVC3 462 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 SNX9Q9Y5X1 595 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 ALPK3Q96L96 1907 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 DDHD2O94830 711 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 ATICP31939 592 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 RFC2P35250 354 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 EIF4A3P38919 411 aaKnown RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 HNRNPH2P55795 449 aaKnown RBP17.41■□□□□ 0.38
SNAP47-213ENST00000617596 PTK2Q05397 1052 aa17.41■□□□□ 0.38
SNAP47-213ENST00000617596 MYO1EQ12965 1108 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms