RNA–Protein interactions for RNA: ENST00000617164.4

BARD1-212, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-212ENST00000617164 ATG16L1Q676U5 607 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
BARD1-212ENST00000617164 DDX53Q86TM3 631 aaKnown RBP12.88□□□□□ -0.35
BARD1-212ENST00000617164 CHP1Q99653 195 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 SLITRK3O94933 977 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 RAG1P15918 1043 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 CYP24A1Q07973 514 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 TATDN1Q6P1N9 297 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 C1orf54Q8WWF1 131 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 RNF208Q9H0X6 261 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 FKTNO75072 461 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 IRF1P10914 325 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 CCT5P48643 541 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
BARD1-212ENST00000617164 DCAF6Q58WW2 860 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 LRP10Q7Z4F1 713 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 ATL2Q8NHH9 583 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 TMEM117Q9H0C3 514 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 PIK3CDO00329 1044 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 SLC2A3P11169 496 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 LHX1P48742 406 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 NNTQ13423 1086 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 DDX47Q9H0S4 455 aaKnown RBP12.88□□□□□ -0.35
BARD1-212ENST00000617164 NOVA2Q9UNW9 492 aaKnown RBP12.88□□□□□ -0.35
BARD1-212ENST00000617164 TRPV2Q9Y5S1 764 aa12.88□□□□□ -0.35
BARD1-212ENST00000617164 PTGISQ16647 500 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 VSIG10LQ86VR7 867 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 TTC8Q8TAM2 541 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ABCF3Q9NUQ8 709 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ROBO1Q9Y6N7 1651 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ZNF541Q9H0D2 1346 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 COPEO14579 308 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 CASQ2O14958 399 aaPredicted RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 AP1G2O75843 785 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 CELF3Q5SZQ8 465 aaKnown RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 DEFB128Q7Z7B8 93 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 BCAS4Q8TDM0 211 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 PCDHB12Q9Y5F1 795 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ATRNO75882 1429 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 CFAP69A5D8W1 941 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 PLA2G6O60733 806 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 SNX2O60749 519 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 LGALS2P05162 132 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 NCAM1P13591 858 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 MTF1Q14872 753 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 CTXN3Q4LDR2 81 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 TTC23LQ6PF05 361 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 GPR142Q7Z601 462 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 APBA2Q99767 749 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 MUC3BQ9H195 1237 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 SHPRHQ149N8 1683 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 A0A087WUV0 522 aaPredicted RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 TMEM88BA6NKF7 163 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 FOXP2O15409 715 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 GRAP2O75791 330 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 PCK1P35558 622 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 IZUMO3Q5VZ72 239 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 SLC27A1Q6PCB7 646 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 BAG5Q9UL15 447 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 INTUQ9ULD6 942 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 E5RI56 91 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 F5H423 210 aaPredicted RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 PSMC6P62333 389 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ZNF280DQ6N043 979 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 BTNL9Q6UXG8 535 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ATP6V0D2Q8N8Y2 350 aa12.87□□□□□ -0.35
BARD1-212ENST00000617164 ALKBH8Q96BT7 664 aaKnown RBP12.87□□□□□ -0.35
BARD1-212ENST00000617164 PI4K2BG5E9Z4 385 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 KCNN4O15554 427 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 ALDH2P05091 517 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 ARSEP51690 589 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 PDIA2Q13087 525 aaKnown RBP12.86□□□□□ -0.35
BARD1-212ENST00000617164 TRIM65Q6PJ69 517 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 RASSF3Q86WH2 238 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 EXT2Q93063 718 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
BARD1-212ENST00000617164 LTN1O94822 1766 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 AKAP12Q02952 1782 aa12.86□□□□□ -0.35
BARD1-212ENST00000617164 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms