RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 GAB3Q8WWW8 586 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 MSANTD3Q96H12 275 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 WASF3Q9UPY6 502 aa19.27■□□□□ 0.68
TRAPPC3-209ENST00000616395 SRRM3A6NNA2 597 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 TTLL13PA6NNM8 815 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 SOBPA7XYQ1 873 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 HEPACAM2A8MVW5 462 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 TBX3O15119 743 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 CCNT1O60563 726 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 RPP40O75818 363 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 ABLIM3O94929 683 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 SEC24AO95486 1093 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 BMP15O95972 392 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 PXNP49023 591 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 CLCNKBP51801 687 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 DGKKQ5KSL6 1271 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 RNF43Q68DV7 783 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 SLC8B1Q6J4K2 584 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 CACNA2D4Q7Z3S7 1137 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 NOSTRINQ8IVI9 506 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 TRPV4Q9HBA0 871 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 CYP4F11Q9HBI6 524 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 TFIP11Q9UBB9 837 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 INSL5Q9Y5Q6 135 aa19.26■□□□□ 0.67
TRAPPC3-209ENST00000616395 ATF2P15336 505 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 BRCC3P46736 316 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 ARPP19P56211 112 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TCEAL6Q6IPX3 200 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 C1orf228Q6PIY5 440 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 LRSAM1Q6UWE0 723 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TPH2Q8IWU9 490 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 HAS1Q92839 578 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TCEAL3Q969E4 200 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 RSPRY1Q96DX4 576 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 ADAM33Q9BZ11 813 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 PDZD7Q9H5P4 517 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 C8orf33Q9H7E9 229 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 GDPD2Q9HCC8 539 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 RCOR1Q9UKL0 485 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 LAMA1P25391 3075 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TMEM8BA6NDV4 472 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 SPECC1L-ADORA2AF8WAN1 911 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 EXTL3O43909 919 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 DGAT1O75907 488 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TOP3BO95985 862 aaKnown RBP19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 MYL4P12829 197 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 MPLP40238 635 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 RING1Q06587 406 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 ZNF252P-AS1Q0IIN9 211 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 YAF2Q8IY57 180 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TCEAL8Q8IYN2 117 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 C3orf58Q8NDZ4 430 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 TTC8Q8TAM2 541 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 POLR3FQ9H1D9 316 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 PRMT7Q9NVM4 692 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 LHX6Q9UPM6 363 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 PCDHGA5Q9Y5G8 931 aa19.25■□□□□ 0.67
TRAPPC3-209ENST00000616395 IGF2RP11717 2491 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 MYBPHLA2RUH7 354 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 LRRIQ4A6NIV6 560 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 TRAPPC3O43617 180 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 SLITRK3O94933 977 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 PRKCBP05771 671 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 CTHP32929 405 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 ME1P48163 572 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 GLRA4Q5JXX5 417 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 IQCEQ6IPM2 695 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 FAM173BQ6P4H8 233 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 PRIMPOLQ96LW4 560 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 GZF1Q9H116 711 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 GOLGA2P5Q9HBQ8 144 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 VPS45Q9NRW7 570 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 GDAQ9Y2T3 454 aa19.24■□□□□ 0.67
TRAPPC3-209ENST00000616395 PKD1L2Q7Z442 2459 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 N4BP3O15049 544 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 CHADO15335 359 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 ATP2B1P20020 1258 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 CCINQ13939 588 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 PON2Q15165 354 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 TEAD2Q15562 447 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 UPP1Q16831 310 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 PPP4R3AQ6IN85 833 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 CCDC73Q6ZRK6 1079 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 RALGPS2Q86X27 583 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 ELMOD1Q8N336 334 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 FAM200AQ8TCP9 573 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 GATA6Q92908 595 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 ZNF512Q96ME7 567 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 PPP1R10Q96QC0 940 aaKnown RBP19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 FZD8Q9H461 694 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 SLITRK6Q9H5Y7 841 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 CEP72Q9P209 647 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 USP20Q9Y2K6 914 aa19.23■□□□□ 0.67
TRAPPC3-209ENST00000616395 PDCD11Q14690 1871 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 MARCH6O60337 910 aa19.22■□□□□ 0.67
TRAPPC3-209ENST00000616395 GCFC2P16383 781 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms