RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 CUL4BQ13620 913 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 EFR3AQ14156 821 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 NR1I3Q14994 352 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 FAM133BQ5BKY9 247 aaKnown RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 LMBRD2Q68DH5 695 aaPredicted RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 CD300LDQ6UXZ3 194 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 DPP8Q6V1X1 898 aaPredicted RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 BRINP3Q76B58 766 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 GALNT5Q7Z7M9 940 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 ALYREFQ86V81 257 aaKnown RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 CD163Q86VB7 1156 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 AMIGO3Q86WK7 504 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 GATAD2AQ86YP4 633 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 CCDC117Q8IWD4 279 aaPredicted RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 LILRA3Q8N6C8 439 aaPredicted RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 OR1N1Q8NGS0 311 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 NKD2Q969F2 451 aaPredicted RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 HVCN1Q96D96 273 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 RSRC1Q96IZ7 334 aaKnown RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 SNX27Q96L92 541 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 NUDT16L1Q9BRJ7 211 aaKnown RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 A1CFQ9NQ94 594 aaKnown RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 PRDM7Q9NQW5 492 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 DLL4Q9NR61 685 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 HELLSQ9NRZ9 838 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 KCND1Q9NSA2 647 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 ZDHHC8Q9ULC8 765 aa5.8□□□□□ -1.48
RFC3-203ENST00000616236 RUVBL1Q9Y265 456 aaKnown RBP5.8□□□□□ -1.48
RFC3-203ENST00000616236 A0A087X0M5 115 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 A0A1B0GX30 115 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 A0A1W2PPH5 198 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 FSD2A1L4K1 749 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 MBD3L4A6NDZ8 208 aaPredicted RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 MBD3L3A6NE82 208 aaPredicted RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 PRSS29PA6NIE9 313 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 PRR19A6NJB7 356 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 FCHO1O14526 889 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 TIPRLO75663 272 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 HPXP02790 462 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 A1BGP04217 495 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 SBK3P0C264 359 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 RARBP10826 455 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 CD8BP10966 210 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 RPS6KB1P23443 525 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 KLRC1P26715 233 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 IL1R2P27930 398 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 CCR5P51681 352 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 COPAP53621 1224 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 PRKAA2P54646 552 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 CCNG2Q16589 344 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 WDR72Q3MJ13 1102 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 C1QTNF12Q5T7M4 302 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 DCAF12L1Q5VU92 463 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 ARL6IP4Q66PJ3 421 aaKnown RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 RPTNQ6XPR3 784 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 CXXC5Q7LFL8 322 aaKnown RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 ZDHHC13Q8IUH4 622 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 SIAH1Q8IUQ4 282 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 TRMT2AQ8IZ69 625 aaKnown RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 SLC15A4Q8N697 577 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 DNAJC5GQ8N7S2 189 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 STPG3Q8N7X2 389 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 ANKRD52Q8NB46 1076 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 IPCEF1Q8WWN9 437 aaPredicted RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 CFHR4Q92496 578 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 ALG3Q92685 438 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 ZNF775Q96BV0 537 aaPredicted RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 COG8Q96MW5 612 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 UIMC1Q96RL1 719 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 PREBQ9HCU5 417 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 ANKEF1Q9NU02 776 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 SPATA6Q9NWH7 488 aaPredicted RBP5.79□□□□□ -1.48
RFC3-203ENST00000616236 GPRC5DQ9NZD1 345 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 ZFP69BQ9UJL9 534 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 MID2Q9UJV3 735 aa5.79□□□□□ -1.48
RFC3-203ENST00000616236 A0A1W2PRQ8 180 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 C1QTNF9BB2RNN3 333 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 GRM6O15303 877 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 RASSF9O75901 435 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ACTL6BO94805 426 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 IDEP14735 1019 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ALOX15P16050 662 aaPredicted RBP5.78□□□□□ -1.48
RFC3-203ENST00000616236 POLD1P28340 1107 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 CRHR1P34998 444 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 PTPN7P35236 360 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 SEC24CP53992 1094 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 POLE2P56282 527 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 ERVFRD-1P60508 538 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 UBE3AQ05086 875 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 FSTL1Q12841 308 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 SLC12A1Q13621 1099 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 KRT32Q14532 448 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 KIF22Q14807 665 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 RAB3GAP1Q15042 981 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 PLCL1Q15111 1095 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 SPECC1Q5M775 1068 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 TMTC4Q5T4D3 741 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 OTOP2Q7RTS6 562 aa5.78□□□□□ -1.48
RFC3-203ENST00000616236 KRT28Q7Z3Y7 464 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms