RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 CLNS1AP54105 237 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MCL1Q07820 350 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MXD4Q14582 209 aaPredicted RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 RRP1BQ14684 758 aaKnown RBP5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 HIF1AQ16665 826 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 KCNT1Q5JUK3 1230 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 MFSD7Q6UXD7 560 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 CD302Q8IX05 232 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 EMC1Q8N766 993 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 RNF169Q8NCN4 708 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 SEMA4DQ92854 862 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 STMN2Q93045 179 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 ATP2A3Q93084 1043 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRABDQ9H4I3 376 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 PXMP2Q9NR77 195 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 DCTN4Q9UJW0 460 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 COQ4Q9Y3A0 265 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTLL3Q9Y4R7 772 aa5.96□□□□□ -1.46
SYNCRIP-204ENST00000616122 SYNJ2BP-COX16A0A087WUM0 186 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 FSCN2O14926 492 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CSDE1O75534 798 aaKnown RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SARNPP82979 210 aaKnown RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 DNAJC3Q13217 504 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCNG2Q16589 344 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLFN11Q7Z7L1 901 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCNYQ8ND76 341 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 OR6B3Q8NGW1 331 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CRYGNQ8WXF5 182 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 RILPQ96NA2 401 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTC25Q96NG3 672 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 MCEEQ96PE7 176 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 NEUROG2Q9H2A3 272 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CISHQ9NSE2 258 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 KLC4Q9NSK0 619 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 COX16Q9P0S2 106 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 USP15Q9Y4E8 981 aaPredicted RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SNX9Q9Y5X1 595 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCT8L1PA6NM43 557 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 NBPF20Q3BBV1 942 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 EAPPQ56P03 285 aaPredicted RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 ZPBP2Q6X784 338 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SESTD1Q86VW0 696 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CHST13Q8NET6 341 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPATA33Q96N06 139 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 LRRC37BQ96QE4 947 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTC28Q96AY4 2481 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 FAM47DPA6NHR8 397 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 KRT38O76015 456 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 PTPRAP18433 802 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 PTGER2P43116 358 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 NAMPTP43490 491 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 ATP13A4Q4VNC1 1196 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPATA21Q7Z572 469 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 LRRC6Q86X45 466 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 OR5B17Q8NGF7 314 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTC17Q96AE7 1141 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TGS1Q96RS0 853 aaKnown RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 IFT122Q9HBG6 1241 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 WRAP73Q9P2S5 460 aaPredicted RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SLC12A6Q9UHW9 1150 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 AJAP1Q9UKB5 411 aaPredicted RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARL2BPQ9Y2Y0 163 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 A0A0G2JND7 137 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CALCAP01258 141 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 ARL4AP40617 200 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 RFC5P40937 340 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TTLL4Q14679 1199 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CCDC110Q8TBZ0 833 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 ACSF2Q96CM8 615 aaPredicted RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 GMLQ99445 158 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 NTPCRQ9BSD7 190 aaKnown RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 MTMR12Q9C0I1 747 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 A6NJR5 290 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 DHX15O43143 795 aaKnown RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRAPPC3O43617 180 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TBC1D12O60347 775 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 PPFIA2O75334 1257 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 EGFRP00533 1210 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 NUDT17P0C025 328 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TGFB3P10600 412 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 DSG3P32926 999 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 FLT3P36888 993 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 UGCGQ16739 394 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SMTNL2Q2TAL5 461 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TRPM8Q7Z2W7 1104 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 EXD1Q8NHP7 514 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 SPATA18Q8TC71 538 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 VCPIP1Q96JH7 1222 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 TSNARE1Q96NA8 513 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 LRRC4Q9HBW1 653 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 RAB6BQ9NRW1 208 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 CHD2O14647 1828 aaKnown RBP5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 ATRNL1Q5VV63 1379 aa5.95□□□□□ -1.46
SYNCRIP-204ENST00000616122 GOLGA8RI6L899 631 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 M0QYV0 167 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 GJB6O95452 261 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 BRD2P25440 801 aaKnown RBP5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 GPC3P51654 580 aa5.94□□□□□ -1.46
SYNCRIP-204ENST00000616122 HSD17B4P51659 736 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms