RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SMG5Q9UPR3 1016 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-208ENST00000615468 TSC22D4Q9Y3Q8 395 aa10.95□□□□□ -0.66
TNFAIP3-208ENST00000615468 MYH3P11055 1940 aa10.95□□□□□ -0.66
TNFAIP3-208ENST00000615468 COL16A1Q07092 1604 aaPredicted RBP10.95□□□□□ -0.66
TNFAIP3-208ENST00000615468 DOT1LQ8TEK3 1739 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 FCHO1O14526 889 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 NDC80O14777 642 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 LSM1O15116 133 aaKnown RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ZNF862O60290 1169 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 MAGEA4P43358 317 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 PLOD1Q02809 727 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 NR1H3Q13133 447 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 GRIK5Q16478 980 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 IZUMO3Q5VZ72 239 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 TRABD2AQ86V40 505 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 TLE6Q9H808 572 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 CHST7Q9NS84 486 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ABCA3Q99758 1704 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 A0A1W2PPM1 405 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLC37A4O43826 429 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 STAMBPO95630 424 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 PLA2G4BP0C869 781 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 MYL2P10916 166 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 CTNNA2P26232 953 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 EIF6P56537 245 aaKnown RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 MAPK6Q16659 721 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ZNF444Q8N0Y2 327 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLC44A5Q8NCS7 719 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ICA1LQ8NDH6 482 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 GCNAQ96QF7 691 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ANKRD2Q9GZV1 360 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 KIAA1586Q9HCI6 787 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 APPL1Q9UKG1 709 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 GLI3P10071 1580 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ARHGAP10A1A4S6 786 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 SPECC1L-ADORA2AF8WAN1 911 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 CALUO43852 315 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 AKAP3O75969 853 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 GCNT3O95395 438 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 KITP10721 976 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 VCLP18206 1134 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 ALDH1B1P30837 517 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 CD151P48509 253 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 GTF2IP78347 998 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 DLG1Q12959 904 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 MTM1Q13496 603 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 RASA2Q15283 850 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 TAB3Q8N5C8 712 aaPredicted RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 MANSC1Q9H8J5 431 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 GRID1Q9ULK0 1009 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 PCDHA12Q9UN75 941 aa10.94□□□□□ -0.66
TNFAIP3-208ENST00000615468 CNTNAP4Q9C0A0 1308 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 GGPS1O95749 300 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 GRIA2P42262 883 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 SCNN1DP51172 638 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 CHN2P52757 468 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 KLHDC10Q6PID8 442 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 FRMD5Q7Z6J6 570 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 CORO1BQ9BR76 489 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 MRPL1Q9BYD6 325 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 ITGB4P16144 1822 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 POTEIP0CG38 1075 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 CDK4P11802 303 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 ANXA13P27216 316 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 RPL5P46777 297 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 TMED10P49755 219 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 AQP4P55087 323 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 IGBP1P78318 339 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 GPC5P78333 572 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 GPSM2P81274 684 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 LMNB2Q03252 620 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 NCOA4Q13772 614 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 RASA3Q14644 834 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 C16orf72Q14CZ0 275 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 TRMT5Q32P41 509 aaKnown RBP10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 SYDE2Q5VT97 1194 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 DNAJC19Q96DA6 116 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 POTEB3A0JP26 581 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 POTECB2RU33 542 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 NAA20P61599 178 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 EPHA7Q15375 998 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 POTEBQ6S5H4 581 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 GDPD5Q8WTR4 605 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 C7orf43Q8WVR3 580 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 TTC25Q96NG3 672 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 CYP4F11Q9HBI6 524 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 MARCOQ9UEW3 520 aaPredicted RBP10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 NUMBLQ9Y6R0 609 aa10.93□□□□□ -0.66
TNFAIP3-208ENST00000615468 C15orf38-AP3S2A0A0A6YYH1 394 aa10.92□□□□□ -0.66
TNFAIP3-208ENST00000615468 MEIS1O00470 390 aa10.92□□□□□ -0.66
TNFAIP3-208ENST00000615468 CYTH3O43739 400 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms