RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 STOX1Q6ZVD7 989 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 TAS2R42Q7RTR8 314 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 ADAT2Q7Z6V5 191 aaKnown RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PDZD8Q8NEN9 1154 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 CNOT10Q9H9A5 744 aaKnown RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 A0A087WZ62 844 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 BCAT1P54687 386 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 TMCO4Q5TGY1 634 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 FMR1NBQ8N0W7 255 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PSMB7Q99436 277 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 CINPQ9BW66 212 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 C1QTNF7Q9BXJ2 289 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 ASB7Q9H672 318 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 SAMSN1Q9NSI8 373 aaKnown RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 DNAJC17Q9NVM6 304 aaKnown RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 TCRBV5S4A2TA0A5A2 114 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 ESRRBO95718 433 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 NAA35Q5VZE5 725 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 RAD18Q9NS91 495 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 LRRC4BQ9NT99 713 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 RPTORQ8N122 1335 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 ASMTLO95671 621 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 CHRNA3P32297 505 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 LAMTOR4Q0VGL1 99 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 MTHFD1LQ6UB35 978 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 LINC00523Q86TU6 105 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 CATSPER3Q86XQ3 398 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 SLC5A5Q92911 643 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 TEX12Q9BXU0 123 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 RSAD1Q9HA92 442 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 NAGPAQ9UK23 515 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 SMIM24O75264 130 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 LAG3P18627 525 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF280AP59817 542 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PTK2BQ14289 1009 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 UGP2Q16851 508 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PAN2Q504Q3 1202 aaKnown RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 UGT3A1Q6NUS8 523 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 CHSY1Q86X52 802 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 SNX19Q92543 992 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PPP1R13BQ96KQ4 1090 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 MCCC1Q96RQ3 725 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 FAM129AQ9BZQ8 928 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 PPCSQ9HAB8 311 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 NALCNQ8IZF0 1738 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 BRAFP15056 766 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 VPS41P49754 854 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 PASD1Q8IV76 773 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 FBXL16Q8N461 479 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 GIPC2Q8TF65 315 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 SMYD2Q9NRG4 433 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 AKAP7Q9P0M2 348 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 PRG3Q9Y2Y8 225 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 TTLL13PA6NNM8 815 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 HIST1H2AGP0C0S8 130 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 HIST1H2ADP20671 130 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ACOT2P49753 483 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ANTXR2P58335 489 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ETF1P62495 437 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 TRADDQ15628 312 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZPBP2Q6X784 338 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 MYLK4Q86YV6 388 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 SYN2Q92777 582 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 HIST1H2AHQ96KK5 128 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 HIST1H2AJQ99878 128 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 H2AFJQ9BTM1 129 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 TMEM134Q9H6X4 195 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 MRPL40Q9NQ50 206 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ABI2Q9NYB9 513 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 G3BP2Q9UN86 482 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 DNAJC6O75061 913 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 AARS2Q5JTZ9 985 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ACSF2Q96CM8 615 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 UBXN6Q9BZV1 441 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 EML4Q9HC35 981 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 LIMA1Q9UHB6 759 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 A0A1W2PQJ5 194 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 MYMKA6NI61 221 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 GSTA4O15217 222 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ADCY2Q08462 1091 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 SNX1Q13596 522 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF668Q96K58 619 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 SIK2Q9H0K1 926 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF510Q9Y2H8 683 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 ITIH6Q6UXX5 1313 aa10.25□□□□□ -0.77
TNFRSF9-204ENST00000615230 LRRC53A6NM62 1247 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 ITGB3P05106 788 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 APOA4P06727 396 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 YWHAHQ04917 246 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 DPYDQ12882 1025 aa10.24□□□□□ -0.77
TNFRSF9-204ENST00000615230 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms