RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 CLUL1Q15846 466 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 DUOXA2Q1HG44 320 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 NAA35Q5VZE5 725 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 IQSEC1Q6DN90 963 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 KIAA0319LQ8IZA0 1049 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 NAP1L3Q99457 506 aaPredicted RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 TRIM7Q9C029 511 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 CNOT8Q9UFF9 292 aaKnown RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 COL1A2P08123 1366 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 TRPM7Q96QT4 1865 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 CYP1A1P04798 512 aaPredicted RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 ARF4P18085 180 aaPredicted RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 MAP2K5Q13163 448 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 TAF1CQ15572 869 aaPredicted RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 PPP2R5EQ16537 467 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 DGKDQ16760 1214 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 OLFML2BQ68BL8 750 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 IFNLR1Q8IU57 520 aaPredicted RBP20.41■□□□□ 0.86
MMP28-204ENST00000615136 CAPS2Q9BXY5 557 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 XYLT2Q9H1B5 865 aa20.41■□□□□ 0.86
MMP28-204ENST00000615136 KAT6AQ92794 2004 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 MIF4GDA9UHW6 222 aaKnown RBP20.4■□□□□ 0.86
MMP28-204ENST00000615136 TULP2O00295 520 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 NFICP08651 508 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 CD58P19256 250 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 GNA15P30679 374 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 AP3M2P53677 418 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 POU5F1BQ06416 359 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 TMEM62Q0P6H9 643 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 FAM187BQ17R55 369 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 FOXR1Q6PIV2 292 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 LRIG3Q6UXM1 1119 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 MCOLN2Q8IZK6 566 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 NLRP7Q8WX94 980 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 LRRC45Q96CN5 670 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 NEUROG2Q9H2A3 272 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 GNEQ9Y223 722 aaKnown RBP20.4■□□□□ 0.86
MMP28-204ENST00000615136 GRIN2DO15399 1336 aa20.4■□□□□ 0.86
MMP28-204ENST00000615136 TTI1O43156 1089 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 B4GALT4O60513 344 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 STAG3L1P0CL83 205 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 RRM1P23921 792 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 TBXAS1P24557 533 aaPredicted RBP20.39■□□□□ 0.86
MMP28-204ENST00000615136 IRAK1P51617 712 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 ZNF132P52740 706 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 HIC1Q14526 733 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 SCARA5Q6ZMJ2 495 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 DDX42Q86XP3 938 aaKnown RBP eCLIP20.39■□□□□ 0.86
MMP28-204ENST00000615136 ZSWIM1Q9BR11 485 aa20.39■□□□□ 0.86
MMP28-204ENST00000615136 A6NNZ2 444 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 LACTBL1A8MY62 500 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 WEE2P0C1S8 567 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 TMEM191BP0C7N4 346 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 ZNF865P0CJ78 1059 aaPredicted RBP20.39■□□□□ 0.85
MMP28-204ENST00000615136 TUBB8Q3ZCM7 444 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 ZNF394Q53GI3 561 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 EMC10Q5UCC4 262 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 ADAT2Q7Z6V5 191 aaKnown RBP20.39■□□□□ 0.85
MMP28-204ENST00000615136 ZNF677Q86XU0 584 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 KAT2BQ92831 832 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 CD101Q93033 1021 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 IMPG2Q9BZV3 1241 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 RPF1Q9H9Y2 349 aaKnown RBP20.39■□□□□ 0.85
MMP28-204ENST00000615136 SIX4Q9UIU6 781 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 POLIQ9UNA4 740 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 PLAAQ9Y263 795 aa20.39■□□□□ 0.85
MMP28-204ENST00000615136 DNAH12Q6ZR08 3092 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 TSPAN1O60635 241 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 TMOD1P28289 359 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 HSD17B3P37058 310 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 BPIFB4P59827 614 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 CENPCQ03188 943 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 SAPCD2Q86UD0 394 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 RPS6KC1Q96S38 1066 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 FAM114A2Q9NRY5 505 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 MROH7Q68CQ1 1323 aa20.38■□□□□ 0.85
MMP28-204ENST00000615136 GOLGA6L10A0A0M3HER8 536 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 EIF3HO15372 352 aaKnown RBP eCLIP20.37■□□□□ 0.85
MMP28-204ENST00000615136 DAPK3O43293 454 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 THAP12O43422 761 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 CYP2B6P20813 491 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 ASPAP45381 313 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 PEX5P50542 639 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 NOMO3P69849 1222 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 TRPC3Q13507 836 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 SURF1Q15526 300 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 UAP1Q16222 522 aaPredicted RBP20.37■□□□□ 0.85
MMP28-204ENST00000615136 KIZQ2M2Z5 673 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 SGSM1Q2NKQ1 1148 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 JADE1Q6IE81 842 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 KDM7AQ6ZMT4 941 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 MON1BQ7L1V2 547 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 SRLQ86TD4 932 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 CELF4Q9BZC1 486 aaKnown RBP20.37■□□□□ 0.85
MMP28-204ENST00000615136 NIF3L1Q9GZT8 377 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 FAM49AQ9H0Q0 323 aaPredicted RBP20.37■□□□□ 0.85
MMP28-204ENST00000615136 CDHR5Q9HBB8 845 aa20.37■□□□□ 0.85
MMP28-204ENST00000615136 CISHQ9NSE2 258 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms