RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 CAVIN3Q969G5 261 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 TRIM51Q9BSJ1 452 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 PNPLA4P41247 253 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 C15orf52Q6ZUT6 534 aaKnown RBP15.49■□□□□ 0.07
SNPH-203ENST00000614659 WWP1Q9H0M0 922 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 CHN1P15882 459 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 LSP1P33241 339 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 NAGPAQ9UK23 515 aa15.49■□□□□ 0.07
SNPH-203ENST00000614659 EIF3EP60228 445 aaKnown RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 NCOA4Q13772 614 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 STKLD1Q8NE28 680 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 APPL2Q8NEU8 664 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 FAM217BQ9NTX9 383 aaPredicted RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 USP15Q9Y4E8 981 aaPredicted RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 ALG6Q9Y672 507 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 H7C4K7 107 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 FAM107AO95990 144 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 COMTP21964 271 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 ARHGAP15Q53QZ3 475 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 BTBD8Q5XKL5 378 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 AGGF1Q8N302 714 aaeCLIP15.48■□□□□ 0.07
SNPH-203ENST00000614659 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 ARHGEF26Q96DR7 871 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PPP1R2P1Q96PQ5 205 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 MRPL46Q9H2W6 279 aaKnown RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 NR2E3Q9Y5X4 410 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PDHXO00330 501 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 TRPA1O75762 1119 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PYGBP11216 843 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PPIL2Q13356 520 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 DYNC1I2Q13409 638 aaKnown RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 CD302Q8IX05 232 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 SERPINB12Q96P63 405 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 ZSWIM1Q9BR11 485 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 BFARQ9NZS9 450 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 TTC7AQ9ULT0 858 aaPredicted RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 PCDHB8Q9UN66 801 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 UBR1Q8IWV7 1749 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PLA2G4AP47712 749 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 SERPINB4P48594 390 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PPM1NQ8N819 430 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PPWD1Q96BP3 646 aaKnown RBP15.48■□□□□ 0.07
SNPH-203ENST00000614659 POLD4Q9HCU8 107 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 HEY1Q9Y5J3 304 aa15.48■□□□□ 0.07
SNPH-203ENST00000614659 PCSK1P29120 753 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 COILP38432 576 aaPredicted RBP15.47■□□□□ 0.07
SNPH-203ENST00000614659 IRAK1P51617 712 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 PRKCEQ02156 737 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 ACAD10Q6JQN1 1059 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 SH3RF1Q7Z6J0 888 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 PNKPQ96T60 521 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 MRGBPQ9NV56 204 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 ANKRD65E5RJM6 399 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 GZMAP12544 262 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 CDH6P55285 790 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 AP2B1P63010 937 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 KRT80Q6KB66 452 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 RASSF3Q86WH2 238 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 NUDCD3Q8IVD9 361 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 RAB21Q9UL25 225 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 L1RE1Q9UN81 338 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 ORC6Q9Y5N6 252 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 CARSP49589 748 aaKnown RBP15.47■□□□□ 0.07
SNPH-203ENST00000614659 TMEM132DQ14C87 1099 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 PTGISQ16647 500 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 RWDD4Q6NW29 188 aaKnown RBP15.47■□□□□ 0.07
SNPH-203ENST00000614659 TRIM65Q6PJ69 517 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 KRT35Q92764 455 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 RBM15Q96T37 977 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNPH-203ENST00000614659 DYRK4Q9NR20 520 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 OLFML3Q9NRN5 406 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 SFSWAPQ12872 951 aaKnown RBP15.47■□□□□ 0.07
SNPH-203ENST00000614659 NOGQ13253 232 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 GIT2Q14161 759 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 P3H1Q32P28 736 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 TMEM119Q4V9L6 283 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 CDCA5Q96FF9 252 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 PRMT1Q99873 361 aaKnown RBP15.47■□□□□ 0.07
SNPH-203ENST00000614659 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
SNPH-203ENST00000614659 FAM47DPA6NHR8 397 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 HLA-DRAP01903 254 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 CTSHP09668 335 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 INPP1P49441 399 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 MAP1SQ66K74 1059 aaPredicted RBP15.46■□□□□ 0.07
SNPH-203ENST00000614659 MTHFD1LQ6UB35 978 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 TMC2Q8TDI7 906 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 DACT3Q96B18 629 aaPredicted RBP15.46■□□□□ 0.07
SNPH-203ENST00000614659 UNC45AQ9H3U1 944 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 YY1AP1Q9H869 796 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 STARD7Q9NQZ5 370 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 MAPRE1Q15691 268 aaKnown RBP15.46■□□□□ 0.07
SNPH-203ENST00000614659 ZC2HC1CQ53FD0 456 aaPredicted RBP15.46■□□□□ 0.07
SNPH-203ENST00000614659 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 KCNH7Q9NS40 1196 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 TBX20Q9UMR3 447 aa15.46■□□□□ 0.07
SNPH-203ENST00000614659 CABYRO75952 493 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms