RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 AKAP14Q86UN6 197 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 P3H2Q8IVL5 708 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 RASGRP4Q8TDF6 673 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 SLC9A2Q9UBY0 812 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 SYNJ2BP-COX16A0A087WUM0 186 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 SURF1Q15526 300 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 MEI1Q5TIA1 1274 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 ENOSF1Q7L5Y1 443 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 KRT73Q86Y46 540 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 FAM162AQ96A26 154 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 EFCAB1Q9HAE3 211 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 CCDC59Q9P031 241 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 COX16Q9P0S2 106 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 HOXC9P31274 260 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 PTK2BQ14289 1009 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 MAPK11Q15759 364 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 CENPPQ6IPU0 288 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 BNC2Q6ZN30 1099 aaPredicted RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 AENQ8WTP8 325 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 AIFM3Q96NN9 605 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 NDNQ99608 321 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 SNRPAP09012 282 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 KCNQ4P56696 695 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 ANGPT1Q15389 498 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 LRRC49Q8IUZ0 686 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 WDR12Q9GZL7 423 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 ZNF180Q9UJW8 692 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 SERPINH1P50454 418 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 DPYDQ12882 1025 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 COASYQ13057 564 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 TRIQKQ629K1 86 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 CLVS1Q8IUQ0 354 aaPredicted RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHD1-212ENST00000614616 ZC3H12CQ9C0D7 883 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 LRRIQ4A6NIV6 560 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 FESP07332 822 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 NT5C2P49902 561 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 GPATCH4Q5T3I0 446 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 TMEM237Q96Q45 408 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 STK33Q9BYT3 514 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 INPP5FQ9Y2H2 1132 aa14.4□□□□□ -0.1
CHD1-212ENST00000614616 MRPL11Q9Y3B7 192 aaKnown RBP14.4□□□□□ -0.1
CHD1-212ENST00000614616 PVALEFA0A1B0GWK0 134 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 TBXAS1P24557 533 aaPredicted RBP14.39□□□□□ -0.11
CHD1-212ENST00000614616 HEATR6Q6AI08 1181 aaKnown RBP14.39□□□□□ -0.11
CHD1-212ENST00000614616 NET1Q7Z628 596 aaPredicted RBP14.39□□□□□ -0.11
CHD1-212ENST00000614616 BEST2Q8NFU1 509 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 PCIF1Q9H4Z3 704 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 PCMTD2Q9NV79 361 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 TRPC5OSA6NMA1 111 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 SFI1A8K8P3 1242 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 PARP10Q53GL7 1025 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 C4orf50Q6ZRC1 276 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 UBASH3BQ8TF42 649 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 COX4I2Q96KJ9 171 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 DCUN1D5Q9BTE7 237 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 SMARCAL1Q9NZC9 954 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ARHGAP17Q68EM7 881 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 IKBIPQ70UQ0 350 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 BHMT2Q9H2M3 363 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 MAD2L2Q9UI95 211 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 AREL1O15033 823 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 APOA4P06727 396 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ATP2C1P98194 919 aaPredicted RBP14.39□□□□□ -0.11
CHD1-212ENST00000614616 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 CACNA2D2Q9NY47 1150 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ASXL2Q76L83 1435 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 EPHB2P29323 1055 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 FNTAP49354 379 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 SARSP49591 514 aaKnown RBP14.39□□□□□ -0.11
CHD1-212ENST00000614616 TPTE2Q6XPS3 522 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ENKURQ8TC29 256 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ZNF577Q9BSK1 485 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ATP7BP35670 1465 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 IMPDH2P12268 514 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 SKIV2L2P42285 1042 aaKnown RBP14.39□□□□□ -0.11
CHD1-212ENST00000614616 FBXO11Q86XK2 927 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 ARHGEF26Q96DR7 871 aa14.39□□□□□ -0.11
CHD1-212ENST00000614616 TLR3O15455 904 aaKnown RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 CNOT3O75175 753 aaKnown RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 POLR2EP19388 210 aaKnown RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 ITGA8P53708 1063 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 EIF4A1P60842 406 aaKnown RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 BNC1Q01954 994 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 KRT27Q7Z3Y8 459 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 TPCN2Q8NHX9 752 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 RAD54LQ92698 747 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 TRIM45Q9H8W5 580 aaPredicted RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 HSPBP1Q9NZL4 362 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 RARGP13631 454 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 BORCS5Q969J3 196 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 TMEM120AQ9BXJ8 343 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 C6orf62Q9GZU0 229 aaPredicted RBP14.38□□□□□ -0.11
CHD1-212ENST00000614616 CTNNAL1Q9UBT7 734 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 EVPLLA8MZ36 301 aa14.38□□□□□ -0.11
CHD1-212ENST00000614616 MEIS1O00470 390 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms