RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 FCHO2Q0JRZ9 810 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 PLD1Q13393 1074 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 TXNDC11Q6PKC3 985 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 HAUS6Q7Z4H7 955 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 RALGPS2Q86X27 583 aaPredicted RBP18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 TTC8Q8TAM2 541 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 KIFAP3Q92845 792 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 RSPRY1Q96DX4 576 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 SUSD3Q96L08 255 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 ZMAT2Q96NC0 199 aaKnown RBP18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 TMEM60Q9H2L4 133 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 C2orf42Q9NWW7 574 aa18.83■□□□□ 0.6
CSNK1E-215ENST00000612795 MYBPHLA2RUH7 354 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 BTBD18B2RXH4 712 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 DPYSL4O14531 572 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 CTDNEP1O95476 244 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 MCM7P33993 719 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 FOSBP53539 338 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 PON2Q15165 354 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 XKR4Q5GH76 650 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 RNF19BQ6ZMZ0 732 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 DIS3L2Q8IYB7 885 aaKnown RBP18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 DDX12PQ92771 950 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 TBC1D32Q96NH3 1257 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 POLD4Q9HCU8 107 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 ANK1P16157 1881 aa18.82■□□□□ 0.6
CSNK1E-215ENST00000612795 BAHCC1Q9P281 2608 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 CCDC169A6NNP5 214 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 EPN2O95208 641 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 ZNF806P0C7X5 589 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 CCDC192P0DO97 292 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 RPA1P27694 616 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 MARCKSP29966 332 aaPredicted RBP18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 HOXA6P31267 233 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 TRIM29Q14134 588 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 ARHGAP29Q52LW3 1261 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 WDR44Q5JSH3 913 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 STPG1Q5TH74 334 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 GPIHBP1Q8IV16 184 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 GAB3Q8WWW8 586 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 C18orf25Q96B23 403 aaPredicted RBP18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 LOXL4Q96JB6 756 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 ACAP3Q96P50 834 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 PGLYRP2Q96PD5 576 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 ACO2Q99798 780 aaKnown RBP18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 TCHPQ9BT92 498 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 MRPL4Q9BYD3 311 aaKnown RBP18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
CSNK1E-215ENST00000612795 RPP40O75818 363 aaKnown RBP18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 HARSP12081 509 aaKnown RBP18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 KCNE1P15382 129 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 EPHB3P54753 998 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 STXBP5Q5T5C0 1151 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 HAUS3Q68CZ6 603 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 CACNA2D4Q7Z3S7 1137 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 TMC8Q8IU68 726 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 ARID3BQ8IVW6 561 aaPredicted RBP18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 SYNPOQ8N3V7 929 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 ZFYVE19Q96K21 471 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 BHMT2Q9H2M3 363 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 RXFP3Q9NSD7 469 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 CNTN3Q9P232 1028 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 PCDHB8Q9UN66 801 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 DENND4CQ5VZ89 1909 aa18.8■□□□□ 0.6
CSNK1E-215ENST00000612795 TM4SF5O14894 197 aa18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 MCF2P10911 925 aa18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 FDPSP14324 419 aaKnown RBP18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 HOXC13P31276 330 aa18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 YWHAHQ04917 246 aaPredicted RBP18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 CCINQ13939 588 aa18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 TSC2P49815 1807 aa18.79■□□□□ 0.6
CSNK1E-215ENST00000612795 NUP205Q92621 2012 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 EXTL3O43909 919 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 KCNK5O95279 499 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 PROS1P07225 676 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 OR4Q2P0C623 313 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 ALDH1A3P47895 512 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 PXNP49023 591 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 PEX3P56589 373 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 DMP1Q13316 513 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 KBTBD6Q86V97 674 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 TARS2Q9BW92 718 aaKnown RBP18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 LRRC3Q9BY71 257 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 ATXN3LQ9H3M9 355 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
CSNK1E-215ENST00000612795 CEP295Q9C0D2 2601 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 TCHHQ07283 1943 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 OR52Z1P0C646 297 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 MUTP22033 750 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 CCT6AP40227 531 aaKnown RBP18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 MPLP40238 635 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 RAP1GAPP47736 663 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 PLCB2Q00722 1185 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 DUSP4Q13115 394 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 ARHGAP15Q53QZ3 475 aa18.77■□□□□ 0.6
CSNK1E-215ENST00000612795 GPR158Q5T848 1215 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms