RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 NAB2Q15742 525 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 ZNF280BQ86YH2 543 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 RSPH1Q8WYR4 309 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 DDX27Q96GQ7 796 aaKnown RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 UROC1Q96N76 676 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 GANQ9H2C0 597 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 SIX2Q9NPC8 291 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 NLRC4Q9NPP4 1024 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 PLCB1Q9NQ66 1216 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 NXF1Q9UBU9 619 aaKnown RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
PRKN-210ENST00000612540 NUB1Q9Y5A7 615 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 FHOD1Q9Y613 1164 aa13.78□□□□□ -0.2
PRKN-210ENST00000612540 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 B4GALT3O60512 393 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 DDHD2O94830 711 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 P4HA1P13674 534 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
PRKN-210ENST00000612540 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.21
PRKN-210ENST00000612540 PNPLA4P41247 253 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 CLCNKBP51801 687 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 ARHGAP44Q17R89 818 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 SV2CQ496J9 727 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 IQCEQ6IPM2 695 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 RRAGAQ7L523 313 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 CRIPAKQ8N1N5 446 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 LRRC52Q8N7C0 313 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 HASPINQ8TF76 798 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 TAF4BQ92750 862 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 TATDN2Q93075 761 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 IQCDQ96DY2 449 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 SPAG5Q96R06 1193 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 PAAF1Q9BRP4 392 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 KIAA1671Q9BY89 1806 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 APOBEC3GQ9HC16 384 aaKnown RBP13.77□□□□□ -0.21
PRKN-210ENST00000612540 CEP72Q9P209 647 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 DNAJB4Q9UDY4 337 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 DNAJC12Q9UKB3 198 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.21
PRKN-210ENST00000612540 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 PIRO00625 290 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 B3GAT3O94766 335 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 NOL4O94818 638 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 GYPCP04921 128 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 UCHL3P15374 230 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 RFX1P22670 979 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 TBXAS1P24557 533 aaPredicted RBP13.76□□□□□ -0.21
PRKN-210ENST00000612540 CASP14P31944 242 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 MFAP3P55082 362 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 DSC1Q08554 894 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 GOLGA8FQ08AF8 430 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 GOLGA8DPQ0D2H9 430 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 RAB30Q15771 203 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 PHLDB3Q6NSJ2 640 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 HERC6Q8IVU3 1022 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
PRKN-210ENST00000612540 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
PRKN-210ENST00000612540 KAT5Q92993 513 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 MMS19Q96T76 1030 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
PRKN-210ENST00000612540 SNX9Q9Y5X1 595 aa13.76□□□□□ -0.21
PRKN-210ENST00000612540 TLL1O43897 1013 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 GJB5O95377 273 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 USP8P40818 1118 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 SLC11A1P49279 550 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 CUL2Q13617 745 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 UPP1Q16831 310 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 FIGNQ5HY92 759 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 DSTYKQ6XUX3 929 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 FAM81BQ96LP2 452 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 ARID3AQ99856 593 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 TMEM175Q9BSA9 504 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 PRDM12Q9H4Q4 367 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 SMYD3Q9H7B4 428 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 IMPACTQ9P2X3 320 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 FAN1Q9Y2M0 1017 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 LUC7L2Q9Y383 392 aaKnown RBP13.75□□□□□ -0.21
PRKN-210ENST00000612540 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
PRKN-210ENST00000612540 XIRP2A4UGR9 3374 aa13.74□□□□□ -0.21
PRKN-210ENST00000612540 KPNA7A9QM74 516 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms