RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 GOLGA8RI6L899 631 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 WNT10BO00744 389 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 GLI1P08151 1106 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 PDGFRBP09619 1106 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
TMCO1-208ENST00000612311 PAMP19021 973 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 KLC3Q6P597 504 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 MYLK4Q86YV6 388 aaPredicted RBP9.05□□□□□ -0.96
TMCO1-208ENST00000612311 RYBPQ8N488 228 aaPredicted RBP9.05□□□□□ -0.96
TMCO1-208ENST00000612311 SPATA18Q8TC71 538 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 SKA2Q8WVK7 121 aaPredicted RBP9.05□□□□□ -0.96
TMCO1-208ENST00000612311 ARHGEF26Q96DR7 871 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 FSD1LQ9BXM9 530 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 KCNMB3Q9NPA1 279 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 FAM49BQ9NUQ9 324 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 CFAP69A5D8W1 941 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 SPECC1L-ADORA2AF8WAN1 911 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 CYP3A4P08684 503 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 SLURP2P0DP57 97 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 TYK2P29597 1187 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 CYP24A1Q07973 514 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 SMTNL2Q2TAL5 461 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 ITPRIPL1Q6GPH6 555 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 LRRC31Q6UY01 552 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 LRRC55Q6ZSA7 311 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 FBXO25Q8TCJ0 367 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 DNAJC19Q96DA6 116 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 HPDLQ96IR7 371 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 DDX23Q9BUQ8 820 aaKnown RBP9.05□□□□□ -0.96
TMCO1-208ENST00000612311 RSAD1Q9HA92 442 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 EPS15L1Q9UBC2 864 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 ARL2BPQ9Y2Y0 163 aa9.05□□□□□ -0.96
TMCO1-208ENST00000612311 KPNA7A9QM74 516 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 H0Y3Z8 333 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 H3BQF6 201 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 DDX3XO00571 662 aaKnown RBP eCLIP9.04□□□□□ -0.962e-11■■■■□ 19.8
TMCO1-208ENST00000612311 MEIS2O14770 477 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ZBTB39O15060 712 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 SKIP12755 728 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 GCKP35557 465 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 MMP14P50281 582 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 EPHB1P54762 984 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 SESN2P58004 480 aaPredicted RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 TMEM62Q0P6H9 643 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ART3Q13508 389 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 LAMC2Q13753 1193 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 PGM5Q15124 567 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 FKBP1CQ5VVH2 108 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 NIPA1Q7RTP0 329 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 GPRC5AQ8NFJ5 357 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.04□□□□□ -0.962e-7■■■■■ 62.8
TMCO1-208ENST00000612311 LRGUKQ96M69 825 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 LRRC4BQ9NT99 713 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 PEAK1Q9H792 1746 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 TMEM120BA0PK00 339 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 PPP1R12AO14974 1030 aaPredicted RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 CFLARO15519 480 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 PJA2O43164 708 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 FAM107AO95990 144 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 NLRP11P59045 1033 aaKnown RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 COPS2P61201 443 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 SYCP2LQ5T4T6 812 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 CYP4A22Q5TCH4 519 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 SLC47A2Q86VL8 602 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ATG4AQ8WYN0 398 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 FAM129AQ9BZQ8 928 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 MTMR12Q9C0I1 747 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 FAM96AQ9H5X1 160 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 SYNPO2Q9UMS6 1093 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ANGPTL3Q9Y5C1 460 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 FRMD3A2A2Y4 597 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 FAM47DPA6NHR8 397 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 S100BP04271 92 aaPredicted RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ITGB3P05106 788 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 CYP2C9P11712 490 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 KCNA1Q09470 495 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 MTM1Q13496 603 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 SMAD1Q15797 465 aaKnown RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 RASIP1Q5U651 963 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 APPL2Q8NEU8 664 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 UBA3Q8TBC4 463 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 CYFIP2Q96F07 1278 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ALG13Q9NP73 1137 aaKnown RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ZFATQ9P243 1243 aa9.04□□□□□ -0.96
TMCO1-208ENST00000612311 ZC3H7BQ9UGR2 993 aaKnown RBP9.04□□□□□ -0.96
TMCO1-208ENST00000612311 KITP10721 976 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 TM4SF1P30408 202 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 ELF1P32519 619 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 CLCN3P51790 818 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 SOX10P56693 466 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 PTGISQ16647 500 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 PPWD1Q96BP3 646 aaKnown RBP9.03□□□□□ -0.96
TMCO1-208ENST00000612311 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
TMCO1-208ENST00000612311 TTC1Q99614 292 aa9.03□□□□□ -0.96
TMCO1-208ENST00000612311 MMTAG2Q9BU76 263 aaKnown RBP9.03□□□□□ -0.96
TMCO1-208ENST00000612311 PPCSQ9HAB8 311 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms