RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 GLRA4Q5JXX5 417 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 C9orf50Q5SZB4 431 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 TRAF7Q6Q0C0 670 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 SCARA5Q6ZMJ2 495 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 ZNF571Q7Z3V5 609 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 FAM126BQ8IXS8 530 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 CCDC170Q8IYT3 715 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 C1orf127Q8N9H9 656 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 SMG8Q8ND04 991 aaKnown RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 CCDC42Q96M95 316 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 C16orf45Q96MC5 204 aaPredicted RBP8.7□□□□□ -1.02
TARDBP-213ENST00000611963 ARID3AQ99856 593 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 SLC4A5Q9BY07 1137 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 DEF6Q9H4E7 631 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 HAUS4Q9H6D7 363 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 KCND1Q9NSA2 647 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 PRKAG2Q9UGJ0 569 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 PARP2Q9UGN5 583 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 PADI3Q9ULW8 664 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 TFR2Q9UP52 801 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 DAAM1Q9Y4D1 1078 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 IPPQ9Y573 584 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 NUB1Q9Y5A7 615 aa8.7□□□□□ -1.02
TARDBP-213ENST00000611963 SSU72P8A0A1W2PR75 194 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 FAM170AA1A519 330 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 EIF3CLB5ME19 914 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 ZNF263O14978 683 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 ZSCAN12O43309 604 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 AKR1B10O60218 316 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 ZC3H11AO75152 810 aaKnown RBP eCLIP8.69□□□□□ -1.021e-7■■□□□ 12
TARDBP-213ENST00000611963 ASS1P00966 412 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 CALCAP01258 141 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 CD4P01730 458 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 KRT19P08727 400 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 CCDC175P0C221 793 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 KRT5P13647 590 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 FERP16591 822 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 POLR2BP30876 1174 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 PRKCIP41743 596 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 YARSP54577 528 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 MFAP3P55082 362 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 POU5F1Q01860 360 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 PTK2Q05397 1052 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 SHHQ15465 462 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 ASTE1Q2TB18 679 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 SHC3Q92529 594 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 LPPQ93052 612 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 C18orf25Q96B23 403 aaPredicted RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 ZMAT2Q96NC0 199 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 EIF3CQ99613 913 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 ASB7Q9H672 318 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 TMEM39AQ9NV64 488 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 DPP3Q9NY33 737 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 TUBGCP4Q9UGJ1 667 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 POLIQ9UNA4 740 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 PCDHB2Q9Y5E7 798 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 MICAL3Q7RTP6 2002 aa8.69□□□□□ -1.02
TARDBP-213ENST00000611963 LAMA2P24043 3122 aaKnown RBP8.69□□□□□ -1.02
TARDBP-213ENST00000611963 A0A087X0T9 212 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 RCCD1A6NED2 376 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 MEIS3P2A8K0S8 358 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 DCDC2CA8MYV0 355 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 PPEF2O14830 753 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 GPR182O15218 404 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 CYP26A1O43174 497 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 CCP110O43303 1012 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 CAND2O75155 1236 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 ITGB3P05106 788 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 FAM228BP0C875 321 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 RAG1P15918 1043 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 GCNT1Q02742 428 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 GFPT1Q06210 699 aaPredicted RBP8.68□□□□□ -1.02
TARDBP-213ENST00000611963 CUL2Q13617 745 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 DSC3Q14574 896 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 ZNF699Q32M78 642 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 ALKAL1Q6UXT8 129 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 KIAA1328Q86T90 577 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 DNAAF5Q86Y56 855 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 FAM71AQ8IYT1 594 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 OLIG1Q8TAK6 271 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 CXorf38Q8TB03 319 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 SLC20A1Q8WUM9 679 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 IMPG2Q9BZV3 1241 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 PLEKHA5Q9HAU0 1116 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 ACP6Q9NPH0 428 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 LZTFL1Q9NQ48 299 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 FAM105AQ9NUU6 356 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 CNTN3Q9P232 1028 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 TRIM10Q9UDY6 481 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 RABGEF1Q9UJ41 708 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 AGAP1Q9UPQ3 857 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 C2CD2Q9Y426 696 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 PCDHB4Q9Y5E5 795 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 TTC3P53804 2025 aa8.68□□□□□ -1.02
TARDBP-213ENST00000611963 DDX3XO00571 662 aaKnown RBP eCLIP8.67□□□□□ -1.02
TARDBP-213ENST00000611963 OFD1O75665 1012 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms