RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 WDR60Q8WVS4 1066 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 ABTB1Q969K4 478 aaPredicted RBP11.68□□□□□ -0.54
CDH4-202ENST00000611855 FAM20AQ96MK3 541 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 CCDC77Q9BR77 488 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 KIFC3Q9BVG8 833 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 TRABDQ9H4I3 376 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 GPRC5CQ9NQ84 441 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 DMAC2Q9NW81 257 aa11.68□□□□□ -0.54
CDH4-202ENST00000611855 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 GAKO14976 1311 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 NHSQ6T4R5 1651 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ARHGEF35A5YM69 484 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 HNRNPRO43390 633 aaKnown RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 GGPS1O95749 300 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 GSTA2P09210 222 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CETN1Q12798 172 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 PPP2R5CQ13362 524 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 AP3B2Q13367 1082 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CLUL1Q15846 466 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 OLFML2BQ68BL8 750 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CDC42EP5Q6NZY7 148 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ANKS1BQ7Z6G8 1248 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CBWD2Q8IUF1 395 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ANKMY2Q8IV38 441 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 KBTBD2Q8IY47 623 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 PRR11Q96HE9 360 aaPredicted RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 DCLK3Q9C098 648 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 DMAP1Q9NPF5 467 aaPredicted RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 LNPEPQ9UIQ6 1025 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CCDC160A6NGH7 325 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 LMNAP02545 664 aaKnown RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 HLA-DOAP06340 250 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ARP10275 920 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 KRT10P13645 584 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CYP11B1P15538 503 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 CETN2P41208 172 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 MAGEA4P43358 317 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 USP46P62068 366 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 SLC34A1Q06495 639 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ATP13A4Q4VNC1 1196 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 MDH1BQ5I0G3 518 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 DAW1Q8N136 415 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 C7orf43Q8WVR3 580 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 NMD3Q96D46 503 aaKnown RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 TUBGCP5Q96RT8 1024 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 LXNQ9BS40 222 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 TRAIPQ9BWF2 469 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 FHDC1Q9C0D6 1143 aaPredicted RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 MMADHCQ9H3L0 296 aaPredicted RBP11.67□□□□□ -0.54
CDH4-202ENST00000611855 ETNK2Q9NVF9 386 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ATP8B3O60423 1300 aa11.67□□□□□ -0.54
CDH4-202ENST00000611855 ADRB2P07550 413 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 RTP1P59025 263 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 CCDC15Q0P6D6 951 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 ACVR2BQ13705 512 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 SPARCL1Q14515 664 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 LMBRD2Q68DH5 695 aaPredicted RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 SMC6Q96SB8 1091 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 C10orf88Q9H8K7 445 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 KIAA1586Q9HCI6 787 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 ARL8BQ9NVJ2 186 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 DDTLA6NHG4 134 aaPredicted RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 FSCN2O14926 492 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 ZBED4O75132 1171 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 RPS6KA4O75676 772 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 PSMG1O95456 288 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 LYNP07948 512 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 PLS3P13797 630 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 IL1R1P14778 569 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 PIK3CAP42336 1068 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 EFTUD2Q15029 972 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDH4-202ENST00000611855 ZYXQ15942 572 aaKnown RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 PCNX4Q63HM2 1172 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 APLFQ8IW19 511 aaPredicted RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 SNRNP27Q8WVK2 155 aaKnown RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 IFT43Q96FT9 208 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 FAM161BQ96MY7 647 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 CHMP2BQ9UQN3 213 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 TNRC6CQ9HCJ0 1690 aaKnown RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 A6NJR5 290 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 ATP6V1G1O75348 118 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 ASMTLO95671 621 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 NDUFB10O96000 172 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 CYP1A1P04798 512 aaPredicted RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 MYBPC3Q14896 1274 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDH4-202ENST00000611855 PLEKHG4Q58EX7 1191 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 HIC2Q96JB3 615 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 UNC45AQ9H3U1 944 aa11.66□□□□□ -0.54
CDH4-202ENST00000611855 CCNL1Q9UK58 526 aaPredicted RBP11.66□□□□□ -0.54
CDH4-202ENST00000611855 STARD13Q9Y3M8 1113 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms